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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=e0HZzRht66xV9NvEHpJqcfQt-a78mtKX7BQG3ByrD5~~vcOj~bdzqkqz0T3T72DlwSx-ho63IUwPTXrEvFmuNmmsJHszs0pWZGE4iK3BedBzM62h0ALIxYPDb9S~X4gmGxkjI0OVQ6oJ3F-J-gKHidI1DmlCcms1xt0ilg7qtBycX5iuwI25ti1w68jAJtWXsYHJft6hjBY9qT8K27FY5rOVRoYcr~61bpB2pbpBXEEHvF9kpPJ-tqpnS5di~XTcSgvaA-QQzI1UCXxxI5ZtmUz1StfxtHhkxqkqxUsSF1TCoLxs4kxWssut~6RmODcyr2ckq6-9eC2kG7qlbRAW0A__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YVTWFFLfwhFunC0biIlMYk1tieqtydhwrJdDvgSFVQJcJJghYyZ5bcchK41-WWqxKVY-Q6TDIoFMKsdAzeq02Z0Six4evDs2vFFWAYRcXjiaeNQvaQLtscopsaMk0jcJKDVQPHQqN-qlwEOjfhSjU-GTagJD-qoVXG4nXV4Kh8BHh0mF7~jacBTjhm7nUm-3n--W0XJA2Sur~9YlRjDUmtzNZPYKvJBh5X4aPepkdJ2uPvCofxl9f~mfuVZggCFm3SswkELXusd7WS~qMHSMekN-9Uqm8VmWn4d12X2v0dtW9Olees0xjVNJpj24o1XM91ve~QZlDMPSqEEfDTHPkg__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=jF3h9mnoittvFLSI5hD3C6JPBqokF3cEbgvaH2BMWDXqiXZVXaFnvFa1geiLnCECurzbjAGe4~YI6nqfp8CbfDDOIfizI-k5MoUULteCQ9wUzd4PmR4IaPAWzESxd0HE-d~WtRcpKS7ZFhCCxz3YtrIagTp8cuD0DM0slpgqQOSvzDlRbOqtk8gyt0A0o6A9VDzTlbNAf-7GWISwlg4JTsGVgxxcpfnyfIHfTwlH1Sicp2Bc8s1wAEjyTFdjPmAvZUuc-6q~kO9MSAm14AI9wFVuGF4p7gROfMF5ysGh3R-~EywE5xSzoLZIzDKklj~~JnBuhZEu7i3yZ~zKoNZtVw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=fJ8a52lm-jGQHPenochf5xMnFXs3izK5YnrqwKultnqaeiVybrnqOyrlVAkpjON7YZ6tyRpZSlozRplBOEQAi~NNw608-0IslQvKrIVAIKDQTk5Q032r~ybEGW8DmFdN9NOhPQ8KOR4RJ~SslmIIsvT2aBlO7A~8hPbA5rydOPJHZHQxOW~~T3EyQsVx070qxpDd3t3RPSwt0sbRDWSRRHiyGQsefg5dqhuatEAPC~tSYKvP8Zb5kuqU6glLHDn7LZuyDkX5RBl-mkuZnUHUycE7IYdFNQRPyQrRExCSR6~kP5hpWM57moIlemc~cEUY2B9VyPPeAxa5zyeNRsZ5zQ__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=huMH1QWALH0d3Smc~9QmYyeKBoKkul~V~7YIf83re9v2~68BwZiiLDyBPZIpdPsZSqmQij9XYEdOdMFJLPlsG88ciddQ1BsRMmoblMdJihnLU-VtlLfSKKxQ16k75xeahfxyOnl7SC~XKpTzGI2dINtQvFbzvHLuJm8L13--BgQXA54slEP~Z8i1v~Y5bxZP9dlSvKhR1U9yLYzI9-GeGMnNleAc0xjArqzlPhdBgDiDjSehtIVfY5X6wP28TGSlkqPk6vQDkNtopjkXF4gBnSP9R~L~rQXa7rAaRqtrkFmrIaM81YObTCSv94j-gjbcKfW6WMGiXny4LGujF0HSxQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=njwJ9gO6Bx5tqd2dzNJcbnHEOeO46C~OrY-AiCNISOp-faKtBM24iW4DFm1fWYXSuV89QNneUD-tJaBxUmR7qFKaqSjiqRDVW2fS4QDc27G6E0QXwtFO~aGKYDYSEqdKCYEz~Wpbs5cQKJfXM-SzBr~Xzqww66tLA7HLwRGA55wkSsb3wxTd4OcWeBtRtI~3muN0RCpAEXKPHCS2FltVSjLevhUifpUC3rq1rSt6w3y7RCPQ5If2fjyLLiXxjGjfks4UlndApSWHu9BQoMIyZ07Ulykhuj6SpR3qX7Bxp~ZfxSlU~XCDjMyv4sgqesLblsQZLHSSwhIJVFuI3qUH7Q__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YTjpvxAqD-ifNZqvmWce8~p5BBw90p577WjeOl2ACjdBsx5hhiZS8T0UNyVDfUCd6aQ4lYlUEkKPKGXV6n4jSdvGoYQISHFqjC-NCRCCjzj4jviM8u-tF58M3BEn0tlKb7GsxFFmc1ObwpTZEdyE~kGbxLidgDUCpZRavoypUF0oy8GzAuv-9LTYjgW-hPdNfaP~SLoBTr0ymPZbI-D5XWW2SDkUfjiPWUAdLxa85fuCj8WEwoVICX6ze48ZaebqzTuxQJHlbyKf7qywuI5Ff63uU3dIiKorQCNDbWwe80xjh4ewEp~sqxZjm5kcBahrUiY4hGbyZElOleRBn5ls5Q__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1765394808&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SHrBo5qLOFEqSyANoDnobEQo0jZnfstAAXXXYpQNA9lLswe5r6~E~m4M9TlYqL6w3kLsfty~orjMUqpA7rExoLjk08RG4qIuGRRi~CHYDqX7asK3IU2Dt0BttVuijZq7az8BVqopw4xF3r12CVFIQO2SeT5pCGggw6x002oNjlKDhGWR6eb9guNr~BSNje33UkIE~QklmmcVOIfOFUbKTtv8o3vuXZtM1xHNv4ZjVxq62eJM~6DRud-UbIaapi-b2-IW6GfKMbt4D77aQox-YIQTX8kiinYnmLKfIPyACSSD-bLpgkn1qnyWtwqx5YrSfdCKyh-TALzh7DEhrEstXg__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes