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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ECtooUHkji7ywYQiCBiuOZzD-3vdZGtk74cS4yWDqtYvv2hRn5--jF04xXV6FuZw3NiIn7a6aArsOtyWzoMa2OQSjMri13Ijjw4A4DQtc4GHGm8JOE2WDCaeB5tX87cKmujFW4WsKbOZcNQ-AjLgk~GCyuodZzgNN-fMwRz7KjWFzZjb2cZZwIB3PtN5I9rC-~yc~zgW0a0HX6EqpscOwy3EhXfiCvdZieqMrqHn8zSnoQ5gQ3rIQ2ja3LrGBmJwOSRI6WJx5OO5vG-G46vgC5M6EjZGbJl5EbTT3TjxYgtIHfKFlLHLSiwuP2d71Oe8VFsVjr8OYFx8t1fhq7On9A__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=edcxXrPK0SX-y0nWShfHnqE~zY~-Y0tVouMROhGhsOwL~9onwcaiPT4qmdkBSz2GStpGJsNL7sZXH8cnHCn2XnOwJFFjyEI83Oz8Ra-hFG6h5P~tBsV1RL5~vygSR69HTY4TTjcfmKVYv7tK-5MO7hqKLLNa8yKaPocohx05w~N7NY4QL-4JHdpdWnHRAqZZnjn0iTYBok4glY1v1HB6bKtXN~IMcSS0U1xBEc~G8J7Ws7Y9D7zVUJZi7kJHr5wr5ReeCm-ywEFgO1hL7YxqpvmgS4Nrk3vPvvTDLxvG2uWdZTPHSYcWauNIAnmNWWvmSxpan6R0XhqdxNKEm4Z8vQ__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=gj~pW-FIzrHz~fOBt3NBFX6JZWZYoOBhZu-CFGpCO8sAfF5pUSxHBxFS-2eytrx~WphdIACakOv-11OHj-308ujTlVfYezZADM32Ov4TCZJU-xRJT-TktElsPij51cCLSG-WwxDPYDmIBDGnA4AQHdgoAkMEfErz1njs3VDXL2H0xq4vR7Hq~W1mBuvx3csZyYOrdQdMTa214R3Bbis9JTyWmdEpSdLr~D-lWHDKDzB8RWH7Su3Djhz9aconCNASuwFGuKBS0WReE3AtllUSfHJiXZS8Jea9q7~vCaaIKVHGzlpRVJUJVBy~Dn-E2jj461a-SSs96Zo6qgIqcqrYDQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=VId6HrCIAus08cm4bJsaKEgjs8mRNfL3b4g5DxygnORz1BdzTb46PJT-ci-wMb1Z8JMiI~fyJc08B3N~nlauoSrHHv36fMvlhtkFCy58F9Y1q8mO6fmX6onRf1~UgrgXMwiqj8KgPHEX-wFbZEJNZivokHcPm4GfjDfDSkkHok1U~pTlBgVaHHfJI8bP7PyU-V6MbBJ4K8ULqPLOHdxmMkAMUj48XX1jYJkeRsKCRoe~e-DUdocv01XQI3NK9y1q2ax996vzMEyt54o~Ubh6F1fR6515s4J2Gn2aQyQjTr5z7o1Rra8xJQTfR2ePwBFfHqEu5cUNbFyJOzMLVXQpaA__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kBsqGsoL6ZH4eOD3esyh5JK4She1AcAz2nEQy-pR39gepM3V2y~K5R6~gd~eatn69ZmyHfJ44lpXLd7Rf1MNBfKStZaXWx-9tXBobgM4PsiKjV1gluYGNwH8K46RD9t0B6CbHl0~xmJvkubH56EMDskkBm38aaqV9-1MgYElCoV2nf7KyU97DX4IIX2X9jgMME5rzBsFmWe8xO9koh7eVxzbkUKLBeM3bq-avN1PJK8VCehZ~OPQ2Nn3yxHQWkoH3HbVswprys6cD8eJ73HF-~qDHsQUo9i29zWz7KbUIoqW9hitxdLPh4rzgars~~I0vHJ3OODNb8t26I59kDX3vA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=AjMpvg0t1k~3yons4mPVD6Cru0e7jhmaHv9kCN-OqpF3T8WvzLhdKEul7uvqYtoIobU3GJk38oG~ml8YIOjBkKb1~OQCkI9mxP0EeAD0dnjTTtXOtQ7Fc7eC5jERXX3S9VnQNKU9CIP1nXYFUAVmlaxhDkzYMvkO6NNJQ79MYqIjPGU9~kBedx5vunQgSAa8cYliGJZlL3zc2fMJ05Fvzop9x7bgkXobjoqHeUDY1iYn~FbwUF45GYGMp4s0Wwg6XEenzolxrx-25kyHarc-Z0088mWBd32DN-CuVNAcx~Zy8tH0UQwSZNbuJroy~yIgG4qfc91MXnphvuSfEI1i5A__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Kw3nJXP4kNpWKjpPVNHkmLPT415F9MStY5TTW4MBakWhveQY2tRtQQSVuvmjyDDUv3UMam2smY4lM8JaArtKKfnnjCrsDF0Z4f5e44eFDDn-U2NzWBc0KN52-fiRO-rbPjYcPBalvNYlowVfY94NCe2AZfXLp4gw~ZBxkHlexWd12GGItae3qPDW2mKWFEbljQdanmvy3L0evt7hiLYqsa-6QZta2Z7jM7HiNPhz8tydPYrUpN8SLyt7YnuhDOT64eQcGQq6rMuYD-MUODkAdifXPSdALHKZL5TEY1DGOXYliVV16oIql6tCejQ8DvsIv1aIaSRj1zpLkilYLuD0Vg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1751382284&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DlsTfNZOZi10i-9cjddJhlLqTS5zRhafvcuZtsE18-ByJT2g4PBzGRhv7DIi8PBj4HUc4pqVsBCncwXyRkf~wFdvFszO~DFh0pSgVnX-FazNTCgkOuLefiN3hOOsaXNvZ81DYtvNB~cRHe27n7gsdLFw-1eswQP8qYdWsWtmlBBDR5RwQ8SYq9ynqLY~5m9nlMzV8NGi77AoeBqBQlMcbnON2u4Qh9kssGJkAnOkx0B7ugVnV9fsImusGUgtbuzY9ZAvBQhs6yLwaxQEhC9s4S-lgMdm7NWTXgteiKX~YaEAGZ19e6C2wyk-JqlKRPENR4wyAbE7pyHPAGGnS3pOTQ__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes