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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ngsPLV24U9N4ve4fFmkqudr1jsVG6CF-nhYm58zc7SkF5r5~Wt6jgeDZG-89LHxuBRphJ5XgV5FBTLluxAc4V8HfDzr699~g~vTRKA-IV~Dtast~sr5zfEgcEjZFM9oMkSLa0Gf71hNtIHkIzF8oxSCJrafyOVzMsJhtek0R8WLu7SiN3uyXlnBCJ6zsaY0n8FqAwvtsgv1OKFc39Nie3pH1bY9PoU7wExmojY60BhccYOL1Aki2lHAF4CsWttYIXWf17jrj-SjK2A64S6JE~w5HSv22VX0D4QqCR9T9PcsrgO4cxFf-RCeWCrB5Hmt4K4wCBn0bQ2bi9RmQLIQbzQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DYAp8dVTIUNYpKAaYOAzDneQUrHQufelqVAD3vL2Q8rUDo5oZu79LVdkILK3CkyshgZJGMfy-7u73pvHnUhglyXoi8TtFEUk-y0bMr5FMMWfz0zQCaMvO~E~hEgvTUcH1TVmrVxZrpOYooznrPtbHgREHKvZ5sw7t8b7ISQuDjH2GWoHvE2aRcu955JbXFU7ZQP8dUjST-khe4vgv6ki9mJBZ4377mz1D7VghufGogb0hk4EAVVqj9uyG9is5Py9Vra8YFXkyltN8p8RhO~9-2zsDeX66b6Baw7BFHZl4dyM28P9anT~VDobNV9y~ILMuuHevAMqqdUQFpWQrkD97A__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=arvNCdzLWT7lK0Knq8h-mRRebkev4suJ2G5x3UevfOsrt59~p-zJ5fsCUGk~o134HJGBkY0vQv-OoQVorUdx95ScR-1JItJDBU11JRfnEs-jUMH3LEGA0JOpZ3P7T5llq7KQCeptZjVdArr5sPXK3j7ZCjFwvVhWLaFdvPhDpfoCnF9B8p7nC0JUEbC1-Uvgge71k2-UKqcUZkad3CW5qa82~ZXH6vlDSWmh17qxzdtoMTtu~aD9J6OIUEonHb4MvK8wKUrH7T~Stta8XkPIuseFyBF4ZeMV81rhKzqwgLfvwte4S4~gsoQco6YtLhixHZg5GDrSbWv340F7fkA0Dg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DUrG2iAiJkp-cZz3N90VWIOwoGTHCM0hK90VIo~1KqXMcCN96YKy-ON1rhFbcoyteGYLjsMLqDmIHohwHpTcGCfqGL3c6zLwmmJ35vyihkCTsHjDO~WlXP9ib-gdQ6zZ8eb-DjfMUUCo7eAECI7kRRW0FrFbCyLb4X6qjUNVD-wFN-INZ6mX2ubcBAqD5kNJJJzQxLvKS7VvLQYnalA1XcSsNbfY3vV5t4ND2qU0Z~2CiScvKCKa8sRG-z3pbJoDmF0jMcG9-GpGlfmvdpvvee~3NF~-530R0tc19-9ykSHupv4hNf1t6KYpxdHckeLLAQznM18Uo6Lsm~d0e5a-Vw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=AgpxgmhIy~CN6PHfoMZ-kc1VkUmhuqtDy~4-iCD~8ExlK6BX8a6zOOGfr52jh~RfaH54tp75JYWceTwFckvOR03BH8jm-MPfANv5dDmTiaWgzSgDGfJcinTLJpcmuHAHVoNroIdVjdIHiSnFcZFwyDJrvIoJ6e8sG3Hm6T9d~plsblcwEIxWEpCFoeXbdaDwvk8pr7MQX6-eOkfVkrwAxK7BECulBCAs3a20I-EHahl~O8Pqp~1wuiXkozP-AsFoY7chTjaB9UVe3BpEgNfC6HzvJ3mUrEmsMUkiUfQSGeraTDtBgCgDaqX3NvFfLWJWK-2sChAxL4tIPmrSy122BQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=D8qLJcAL3FYo6wxPK8PonjC0eps16mN5heWhqK~xNEibsaUkaqsc1wmNv0qpLH6705HCIg1xDQTo1ReMVEINpMqDL248X4UgNomGrrCFeSNK8GLyekUfVBDmn5dqsZv3I4FvNzl023I07Mzgv78aMpl3lwnaqEMszDKPDXwSawQlWRfjyKNZAuTLgmk~bazHx288-KAF1yPqjg2~OHIznUXm7SovxuSORk0FrY4saZhq2gQln6s1Y5mFoEWvWxdgHWATIk~GVsWCnkcHoyVMMo~Kb2nT687X1YgLgpI1Xf5mySAjeKZ58BuDQZRPkKQQSNr7h9hTWTQShzAfW9L8Dg__"

Download is unavailable on mobile devices.

Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=b3RYKAzuS2X8CmS5WoT59KWjMJxuRT7ww2UfSNWiwwdmwVZHmLEeFUfO8I7uDg6RZAv73wsIkQiblJg044ESsnucB6VX3-cHu3~PAsSI5rslF7yE2rv27MdDcA8EQLxpjUa23nTJ7omD~sbYW6VqeIGLLCzbMP6gVD9vLVpTRMtvAz69ZQ-SIzDPZ3Exnu8WHjJAvF2aMO~Tr9ugkh7y0X5SQ4bUl2q0TKX1AvefYK3xy93vFSSRIaFsqVSrh6I9Ye3rzu7xodOjNAWCWDNX1LCqblu~9x6J7kGoAdjHup5JMH~nqCUYEMiX0rLbjhqntGmtaQYDpSon25RoyzZM~A__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1749376465&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ajv0N0ZtcjOQg7e88dJXyeSyPWrHYV-ii7ee5tN6N4XClvuI~HtiMIWSASWrv393VL6o0H54WheIFGkOz7ZWa9tTI0H~FhZQ4ppbCvKgo9NID-iuHVUo9Pguiknekain2JC4T8WPjXcxC8zxatDNUPRLFuDdpVXUfTg6Mu1dTiH2kzEsEfkkoJ655pGFhY9miJPbdLazGqs17o25CZmqLGKCkZVS-fVdvo53A3id5dkgBI1hnoXFcDRkJomYKXjKVF8MfZ-27-8w4~Rs~-6GIdt7ETh~~otng-Lxdw8D-RHbDxKuaoVmaKME61jOQmq496zEkCbr1Bbo4aQgdrGQXA__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes