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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1740204248&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=LF~Qrz8mjvlcgQo185GEQqPiTIZ0JlZRUtmu7UKUCUaWH-1wR3OsB~N8bmU96PHcmekI0IqCNz~XZO4PWkKYXPzEF6-duv6qniGt7xElmNp7BffnflcXP3UB2prxWbsun0YxIgU4GHxV9rrEIZ0Hn8P6IHMxSP7mPW-WHi-YflPEbQxhts39w6E9IaTAC-mF3ONMyDVHbODLVRCkHQBZrhBB~W6lSX35Q~FFtfACl~64e6IN4SelFEUtxzt0NKZYGj9H4lAIRc~LloVkTKR6xRNjPDYQJncwy5EWpJWmPSO0hGJNoCZMaCc6ZZ1GmXLM-m6yj320wRWaNo8s6xnFMw__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1740204248&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RlYoaqAYio0YVy2SV5vT8pA5qXy2lTMF1u1~QNvtnuKKzgOEIxOVR0yvicCDvlgFi6tdNHSiR0wFakDgYzXhswsqyvqMzF4yQCwj~Ruc-4p45Er0GNfvnruCUY3uCgo8jbYWjatdgghMpoYLF2Haz7hwmcwsXYHkoow9hIp1hZ2UW9mJY4o5UMVTZJNf4fUc-ktpENGSw~KDMm00-QXdU4gb9a~V5kEGpntOElTIxFvU2MNKfC7SpiyWlwAKyb0m9HCuv5LqOnVX5~bIkEkuXzn6oKfTczmtsYPBb7f2lLRC~NiUyu5Ga1jMz120Xonq8HxrYqFhfclqECAHhm12ZQ__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger