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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1745718197&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=XgEiXdD0HkjrXRQwn1s665hUfBxmJHZGyZyrvV-74oO63595dYhkoGY0vbkV3h-hDTY-z~L-shh3vtW8JPuXSOhwzVpGzc8313V~NPPEzRRv5lr7lcUfhU3NwI8zaN1sykwZ0SBA0LDMbmFLIiZGVJkidGiIZBNymstB2gGZN2Cja13OORI5OXkxIi4v9s7CnX0sPnqnUw4YIUB-Y0CTYRHKJsuqzH-YXaV~yQYXicM2druIhvSdxjdcV2C88~wxmSLHhUAypSiPovDczJvDWIYVrJFYEoMILZ1h3h-MDNf~mrAsEpNokuBTMw2JEWvEt5MWrkkUHY~Ycnk5WIvAlg__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1745718197&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KzuryaPmTjiArSOtFFptH6SVaT-fxZTL~eMh6FDNU4zdrTbU17cXBRjXG4YC3ZO-nOnM2xf9gxsuabrr6T8LxQmnkanUsdZ47yHK2q~rYI5mly02wZL~X6mN8IyJ2Q33YuQPl-2fLweifyjNvSdj1OSW02vV2L~kaXeg7HGaHuhmOyjkk9kkbJrW7qmGL1dAM4UmhAqv~9RdfPCwcic5PTP2zE0BhBO3rjRbxTwJcinyNamLYBrAdiPCL54gHGHn9GE8PWdnrM1UHFyAHGBbil1GXpMsyY4jGbJdDA~yo5kX-cKa561Pr~Qss0iKx0hbOzDP28ToZD09l1kMaELHAw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger