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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

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    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kpuslNxxTFg70tT1KCVO1QHm91w1JdKLSPXGiaRRCT3CZuMljJi6H0nEB8xiABrA-DCksWw0UL9b0Purz4x3aMoPVOhnRSt-ST2VCNA3jaUTkWI2PY8N02BYT7eEBJ8Ajxiis7U2YIX849RE~No7UXSOmOupADhEd-lcHe7Xp40-UUHjcRbe2mymHTMhSQPSrzivCf3UaNaeej1CrQf-l~yXIM62lExosPlquZ1Y632~CXl3VAPVB-yUjdWh0kFzwtKut31syoGslIsFNX8T7MHOlnmTyi2jieLbxMIUo7e3lkMqZfnuGT29NvhP8pVtWyVYv13dzn7SJ1ipZWs15w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=R2LZx4GG3s4njpQfsEhu2H7Ihoxx-tMcuyfQHhOU7m-8hCNZ0Uj4wX~c-YKYD-8U8ZFCZazZYMl3aC8KW~g8ahHyXh0HBOqBmekQWBcDlt39JH~DodcF8UUbk0bSVx9QNwkE~I1FtSRzUM8XuTX9jYt1ML3QXK4FmwVU5pcXHOeDweNoya0q6AzmawrIO8fPBEEbl1b1vfMT6PccZZ37OjUWN7Pxe3tLKZgJOraWWItVPvf0HGLwjWwLzygy1L-kFpvDsD0pyWqgv7MB5jfGiLjCE0JRqY4kmHHqQCcvkKYUuLO07kug1-upuVAZLQy8hMsrKazN-BD4ER~2oM42rQ__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Tu8yjrxbSzzLHXtRkLmSflM2XIewZMywvZaiwDD7u-RzeVRKLt9DBNBIOuhufF97JlX7KOrN0yIVMnmOCHCaK-DhgPFnipvcU1nPK1NbdffDbxoBdfpb-WK7Du1xzXpq~sKwwIG36-szxLBih16JAmyVT-7jfyDOnMzMRAJGfh0xD6AvfKl4xo46GiBooQ6UcwCeogPdZaNkf3ut3KDwBy5sor2kfy06gz9Qn1mUH5uhpT9uhcq2E3Mm2LXtbDqApgCG0uEe7sFDA1ElLwFReJoMg8cc8EgAuZKoo5RwB0y6O~xvPwHb4Hlvhkza7DtW5nXsz4JJS0VMcssErXoSkA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=CRzYoNixQo0SZnxl6toaQq8bsZDO1Cdw2NZPxSIwfUM7JlPHvEbvKFJZ5ORKmQy2ajy3~u1AUf9lMSgvQ3s8aKWqgAUIEcl2-uOWXWxJblFqTOKt9JXAmMgAoVuvtf~Kaf-uM9LbSm8ZrX7fQa30PCkXKaSV8s~I~aLueGrvsk3ZuI8OsJ6XfSeu6VRwqyWSNzhxo1jKQCNs9hYryypT3zGEa~yShFD4LoEXE5gHUVYCEU-N5IcdJKTSQnbR-W5Y9CB-q5vaIQuqLR0V0RS2wdjG9Lr0SpKFllhRXdP90khFTn5dR~g9YSmDvTpk3dKTNwj0p-w-DF5Pn9jPAPQ6yQ__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=aq-CLLoLjktifQ0lN1oT-lQYH8sJJaN~YdzJo2fMR85Ipm5gbCf9RTVhJo1r3T2ZeMqrTK9IHq1ZBQBEbtsFgGeN9oapqFHFUUTG24KnT7HrIG01TBODvmMpISgMw1Hr7Mid9XiZXfMrFHLqmg8E8HCfBUViKAObhHKbDZr7nb73zVfymrNtOPhbmkTxV~1~XdVd~lHpf3Eu-I06qNeESgEyLLBZp7gT3-UdmH3gSthNRa8o0oi4CvWGvTHRs0ARWuVGbr~2o3HLsKpELlZupvEJBUNBwclxePAdkavJpc4LCwoCDt8JCZv9IQ0yR2FhG19AKtpnaNpXNPcn8M4nwA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=M4L506LRqlnKM9Cu6~PdY0UKmY0Grd-2YtY7eKFHsqrjCBImBowIVOvLzd7KiKxYaMu7Vcze82nXjJUG3lWOHru7wgRdeXQv-2~OCjgc1C-ayO3IE68XCkZMzfom1iYM0zSkf9zZJLj~Q8-mbbsFtgWTPFYndzjpoELUSQ8x33LQgpyUpeopahxF6lq9eqodcMSq7NA5DijjExj2LVnT1Vs28qLRSGWMAJnyPPUOnF8nLK47~NeuIj7c64VWQQSCf33Rpke8fgQDRb57Cn352oEs1TbxEgrHPN4h8kRDL9VlJAHGy6XDY8~C8qtNnzprxMYKqYPe9UPQQ8GduwhmLg__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=d3tH-XR-wmJtXSUI1K-rEcZjOqLtguYDuI31OGds5S-XBuspwvclXdjDyv1AijMdhHTALRh~BRWdasXnd7YC-1jJ7qgxQOI5ShOcVqZSUkq9NPTa0r4sK1mOtCD-4SWwgLv9cXhRBHy9JFnFdnp17zw0jx8zEHpWyif2dBvBIPYn19B4qwAPiGEEP9A-gsTGYIMJP87nbgLva-F9qeQwlH63Pm4baI9i8orTq0ppxp~QjT~HgCXBZPcWf2ct69tUpwfI20MUXg2IMKoKT0hhBeHSB4TmmmE0lweqKBsTul59w8kC83jf2WJIPntuHsBBgEus-eEFGgh9kfGK~xxaww__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1749346399&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=dDI394agH6~oLGvztj-JwmqsdQTaNP-vK6-R4E4qmng3MEV07u1AKq6xQtWb76Kl~0Hxwgi-4J-aVOVpzg-S1EEw6NV1z1GGQ~7UddvPn6~tQqb55kKYaMlJQpyLmvXZUqrbUoH4intdRXeBsa4C4sCw6ZQPegwVFs1Jp1si6UR4ljSMUiD70VOyZtWCrPuKj3bXt9~blSUlZFIWcJWuu-97~LrNCopxSUnLuPtNLJJZ4GQjrygK9ImwV14POxO5cbgFzyjNEr7~-TW4adu1rBbnhwvN15ebkUtSWT5yEKDUy1St1VqvBOYa3QN8NR1ilBKXolLWLa0Cr-1f7OaRrQ__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes