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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Ibj3yUxAyUzIhuhI0Rcgm63JrY6oArZhgCe8tGRxk7qob66anUiMWdBDGTcd0fMWRB525vr1fejmK0mZkh6b57yi9DpChYtQZuaP2hxKqlnWHKIVSo7ZXICbDLpjeS9ZevZcuo3NMoqZeDg1lt1J5dq1UB5QkpCex9TFYx2GjrsuSw7R8uoSXAPTKHGM~M7rPOoImyyeiDEDpvLI4hCp1JM2GnvxpMWz6FdR2JQ3gHemYyYCJ6OycAzEar-gX4oRnmZQWk-9fOBCnqAogB-dRtzmCwq42sWDtLuEEVPch~gzpUr~eK~xFhAzA6wRY0seYtB06IdmouAAtgxrTbrALw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=mahZnPzn26U5ahPhUtG4NSKF-XTVa7muq-YFV31BE5NHqL2LpNWqTw8hAJxA~uaOh6oZRBRgOD8poVpEnuhxXpAgn81FkHKnwTbCcQ-mxbQqLNY7QotaoPBB6icoUS5TOUd-gWOQcV5NRSoDK2KZjJHOrtwKeqwUycRaSYavBwxW2VuTU7oabp-Mx5Ay3naF8Gze7IFJVH3x5aZGqTydFfjHZfOTso9RXrPOm~E-dpPa7bhSU8pyHugpqwdFkVfyR2Hc7Qu5rh7Ft02575cF1OTu9TfEfDXRoy4gAtAoHCWfRQ5KEWjDgtQNv3GnaJkcNahTvFdK-ZTczbeRCZFntw__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=cVlQ7nD~qALhxbtkPjk0~7U-DPH~Ow~C7XJG5DM1S0Q9wHwFvIMvhuOHrPatod3LF5NIp-jZeFCTBnOHpS65jiq-Phh0hFQ64OHJ~-k0pHgZiNY4s1rSwJ6Lqnr2XLjqEcpzmUtsn2JnWN7gc4vjxJZc417Kz2HW3RK0pnYg9C97~s1aQ3qfaWpcoc5rrlnz4lBhKitfTgwlxWtd3p5MB47LGprYV8WK2WaiAuLYW4D4yOdQ2nUvDdGn0leEwngor4r8dfPCNnqDiuc-IHkb9h0BZmqVMEeTt0N0yO0dCEzO69tOBSS0t5d~ciKEOvlfUWeZ4zlcpGml-UHZqYTPZA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SP5AhC3hDV~B945XWSVX4L~Jzso0asS6-VO9QVW9SFGcWAqX6w-fuV1F-Yyx9slH0etYrOerhp4O9o~07LZGJ7kpURuTtLmVUvsfWAtYLjMfMWTpXrfY-ig1lJ3LBgDv9XoMGT5Wno18VeKfySkSqH2KjxFlIGguFRHmZkwo6TEfsfFi7hydAjx9Amfx55f2gF5WSpbXxOe3UBEUWjN4GF8z-pTPVx2TT-l7znAwrL6BqFSNEkkrVGJmCbGjy-rUIMN-TDWyRcxf3HQjyVjo7VZA125k~gEE57XUQWs-w1BLYvzMP3Vmpv7DfShd5k3jCaleyxj-vg4quN6IU9xLdw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=HIFs4KXOqwt0Uj2Y7b6mnHtExwPGgqOuvaCwzzBV915nxBQuSSr5CRo1NSBka5FZcvKPCMBqTj7qfP7IS7IYQZuTbp6C819lkV1W8ZhBrJ31yblq7vQRpcHGAW0L6ZsZ8oMEt31dZVlJWuHSNj4E1qaDhXQMIAd1l0tLYCBaG5ZbX~N3N1VkkKK1Eoh8uR2pjyWp1En-8NFDQIT5ZjaGphAtzuOmXWtSnJKXXg6kaQhyj1WVlv9zVBF10MtQKKEApwZzIEoViqzMbQiOXAmWpBDkjYyvKw0-9uW03PYcUI7NxdG8WC71T9lm4XrS247FecfchepBptNEscT8MnvniA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=me94EmC2sag1YHtQkzvHf4lbWYGzbhept4vNZ-PVWNoM7xqZTMlg578RbybkAgJ63LJAlTeUe5TJVDv2T3EJrevZZU6KJrSLw0SBFNMit69tUKLdL9x~tOSjvmKIeipUczdiUVuV8IqOYtjxSBpI~KqrcqSla0NJpd6T0brIvGpIut3xyik33dGPDfzvj0l1nj1M4alF6Y1~mpJYxbRDsghkOuJjVddFLeEaUXFBRIxd8PBo4sdfmlb37KeUv-HwrRSMg507RZIDXdabsgoJtMhv3kEFhEbY15UQeaI1~EHcI7yOSrZFHNMoZtgNQC3NvQ5lNl65A8CeZqxLdby7oA__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PspxTI3cBuERcgTJKx4c2gY1ofhJoEmIn-NeOZOgegOq1bSGRrUs0DRa20akxIt-xyMvOGTPNVwmGaF70T7FrlK~4pto9Vo8GiNdKy~wRlwZeyPCqM7FKiU8-6Hc~bb6BMZgCl-RdzQecPKeVvILBwcbFaXf7byg1C59r-zSm9GMrhhGaKw-pkEWPtVzpvgZwAHNwSjB3XkzN2EXR1Z-9OyPBuYKjR~uI9ZZ9f5X9F8-ECkCHmxJJ-cyWp~w3lvnlq24qkD~jGgG81-M4cnX6CpSxvZtnJflh40V8rpTQ90ZDAZnzgzPk8ktMy4uTQqnr~Z0V2M4r228c4mveNtjUw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1744384739&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=f97vRdqxEU55gKXSc9GfgfQW8tuOgcUcHelyM5fwEI3m-ZPdmzv7cxD0tmaWx15lSKrvA2nbP8JxfdASua4lRhz-ObRR3dG4PASDxWveF6OL1LQBEPJoiH-EbDIrtHmSS6mD-Gyr7fOUfTHsF-AOroV46uGahFgGygEFPPD6O2vdNdxfOE2T6y07~tYReEOuqZee8dTU5fFTUx4HyWz3YSOflDsauxdGtdVEeFKbEkspRKO2ejUTA8avlKAQKO-2QBRkMsDrJ0HuF83SrYwg091f6QL5ZtZDumY3PysLXTz4mx2zsOOPCG6OOVONNsJyZyBXL3gySn3FIFueVQI4Zg__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes