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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=moShsb2OsthkTKfHFsN1BJni6PO6leCzzSY9QUNo0TBZ3GVIUwH-QE4gPtG30Wed3f16oVx-YTOS61W6tMhRSxAzlAOFwOSzbHo7aflKCqxQY08O3FyYRIaohIEG2uaemSSfThyC4jDT48TC-iBJg-Pz0-V1Cm6lNFbUOaRAEDbE8-X5Mwia55mQIcQcDo7QIMamaCO~lWXtqtxPGZYmRus~kFA1TRQPC3yaw6Kwa3QENrFhUPE7Td5BVXHOx9fk-bNQ9jxDDqR-QBYmSPURS8SUt-uWe7YUWH5svNMXQ97OqDsCfUQn9srtzQY48Cfejk6KclC6e~oGzMNSlBhOhQ__"

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    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=U5r2LtWR8zCnEYNg3hXc6aNQPDKNCe37B7S22wFX8ZE1bhx3FqH1n4k~u~U27KNZoZOUgy9kfRW0h9YLqb6Zf~pybJ53zxfE1QIMWWaxfSAJa1OegybSP4MwhajCkBAWLfuTrwBUyUxWUIbspMrneEIvP-93tJfreie0q1ysmEjLUG4QpjYef9PackU1j4OEFWAi574358jcNCuOUgH-CP0xz0P0rRIfNLn0IXeD-x8Qq7No--BeblgVfHOg0c3udA4~AmUvjFHe1eszvOCpt3qEYEASeBFkEePyrYo0kGNaDndsFdxPg17GGKoz1WgEFnZ9C7xmBRgGMcSh7RvcoA__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

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    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ICJnPasLpgnlEer5zJzCw0d2~1Xqz1tM4XfQHnfdu7ml5v0sokxY~AEdxMAQ2NJxZRDLn4x68S6MYi8YJLVIoxDscXMvAY3Bi-ttgrr~OH3CLg3Un7MkPHU1E2n~v~X2B7C~LU1oydTRYfydgl1ZxmvCvDlmIT8zNASN5Z9vJ4Ld5vNEZ5ETFzvxwVi7JOIfI0suM5YmHt0~p8nYWDaT0T07ZcMsp5Onz~h6BG3J9GhKLN4lYdSppmW8MWolirCGyn29L4Ae45QrKjlM4ax~~AeXwe-tQFpKLfFPYOmIbWabZ9o4isYl4UMKuNuEXGV07EafnYwpx48QEd5wACN~kw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=P6rwZ4ik~fCXFWZtgyJXIHjb7OnK7nhf97yWgGgfIlTIefJo5GPqOkr0bc3JKlhBsHuPD2mKL507iWoNilIP1PIGdab5p5q344M0kYtpG8mln3Akvfqrdx5OTt~I-URg8ORH0q~fWWLxu7iJz31H-r4ax~v~7dPIbV2jZQMve4LBsgSEqrKYE00KZaMjEPtAMDqjUYFjG3qdg5JCBTf8exRLOqAbIWGCAqQHHiNHho7ead504zAygIs374Sgv3TaHpdDUDPxrRxnxEXQ094N9muw3l7Aj2irEW4x2VTtPmFog3Hy4xUmMOF0ySeGq7BwfB63TBGDPNzk98v672rzbQ__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=NRdfkr0LTs-dsOUCfnupRfy2zKlxdXiFtB4x5MVDW-4Ese-zGpKIQLCpG4vT4HkNCKN60Nkowehllm6dVzLRidv9zh2KpPTDfiqJAiHp77k9QSvooGWX2knJ4maYR15MMguTexEXCRcNsWOp2dEWMsa6rPSNk7QLsG8377oCB0zZyZgyTgQSPWz-Gi-ybsfUdr1GMQE2WzaV3QFQDDUK-jqpVd8EZX8oVKwRSg0i7rL0qtlVsExITehdyWcSsBW-gCUlhkwFbMTItrzjy5o2TFDYAc~~l1mzr3V-k~2T2ZmxrMDDrzLMso9HFuBFsxhNdFWt~UXZOYWUHhPsOvudIA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RoOUC0da0XzazfGICja9pu~OLyfq6t4YO19N8jCiLX9zlKl3qkC6evx~BrVH2~Uv1g90FT6JudLPPTVF-P6ngJ2GmXJWUT~cKzqfVU4W2nsdreb-r9qCcJY8luX2xZKYT6ZWpgOYu-Zh~-QtDanxvBTv41DFne6TFnrfwzukEfuEGr0SNRELqqx5aeOYrYHCfW3qdgmVcNEUGRqRT1Bol0bXuf2~C~3JIunuU0rdQ9SG8xlLi9Gb9-sR9wbRd8twAA6mvrXc1Ikf~1UaNqPZHAmJmekHSGlM2XHywSlmmR6HORNKd3WORoVDzRyYQ7GMsh0PHfd-DLmv~RKeXG0S1Q__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=aQNZA1ePuq8sxTyNlA2IfLWL6JZ~9iOsuff74npZCrKP16j7gN3LGDKGHeIYJPZW15xeB0ZXpsGvwv-~IpbhLfufqAk3-rJW~41PjvuT-dYqv~DWv9YMRjue4p8dXccwtpVJbUQs7lQLCs6jfc5wVDiobyNIRQn7gz~EiQIzg1Ez77TdXerAEPo~hu2iqTbidge~Wfm4sKgBjWJzHjNFS2-nyDAmYDB3rTM6iHWBVgWjSDUCos~ZlocaSopmizqTJVarO9rgYgQHev9a~0hnkWf4sXbG9swNBAW6rIPXhOSIhC18u5pcleizazjaVG~NkWV8aKxi8YXK-RhHAMQZfQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1732268272&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KD-BuRODHLiOO7ryNbvBeWxtKAHaXhxsu3Its7svJd07JSmjy0IXQhp775pxiwJ7N84B3ORwH4SPwViaEr9NuWyq247N~lBNf-meogH7FiRrV7yqyFuGqzI7o5u-766GkZvs6jEb~ANcczWhFTwf1glK4eTnSoaqkLJ0UjPrOyX2uuubNAQe0Fo3P1Lf-Bg3kAUDorjWeI6-6FOlkGlqFsAjdvwXCDWmrpxNC6lV~p~DbjOSAKi9UJ~c2w0XOeBwBmRimucxjEl0OnGRk-BmBby7XWe3RbkKY9kzfYnnuaZbt~2NfFmfMf4OBRBgqjPd5GEjSm79JtGQFZKH9ftbfw__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes