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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=E8I4i~qDVQu44J-2wTy7TOt4JLWLruPyreIDGe8DvUM7n7BVX7Tkt1bmnOZhY7GGzhDGemMB-yxO06JrcPP7~QwxK2axsmTeZYrmXOEq72N7S~bP2hNT5LT6unGsiMxJ9bsYx9w4TxBvJqhVk4lF1rZ49~Td5RXZYuTBtGx3z2N6flBDwWvyjnU~syJtWIRPmCQdEx06p0tfiQnvNDm5BhOpiTclYB6LYzL6F7Cfej2KzoOntZDmpNwjR2QWfYlR5vuA5SyalMsB5T4T00l~ua4zHijXj1dkf3NAa303N4AKuaG8gqy4VJdc7ofVuCn3LyrptH~SW-FhDTZkEI5xEA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=JGry6Wsc1EEKMhtBE7UZyJ5uSqSBAxwKnWmu8QKHTIV9CBCB9xtHjrWJLrHtGvoi6iLbQL6bpZjlxw7UfUNYDUwvfjYI8WfiMqeXCFDszakvudS44-iF-94ZitFfF14kBHjYvzi2yhUaa7P0PZplRvJOiZ8Jafb~FSJWU5qKXLOgYBhYWXZQwP5V0MdnBOtaiLL8I98CnaaMshO1tdNLqLle1mUjFKdRYy6gKvRofBLlRGAqowz07c12konCFG-luzAGxkxeGwMWrx8qtOb8raYbKSKQofEMQAGGiGcKRfDMueZzME8kor7-hDO4Gbb3sot4aIGmlfDkShzlcal~Qw__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=P0NhpTh3IX4LXiVZwNcvsVZWP-hYKBJaUZpAwveXniHyIofwgUK3HBaECVouwOw67yxyb4nCbkSQEEqhitfhKHc8ftXf0yQjexkzHVCGsApt8aUiNuNrhNyy2lFkNo3Ao9lALhYhp4Mq29tsSyZE7uaKtsXOMBpQJ4c~DCc~GqMr-E2wJcft9vO2pQOG4NCtUMNv8ZKjn3bUimunrh79REiV~eNfswFK6oyhHMKUgkAnKDFaycXorG382KFB3buDl0f~eNKZU2jE4e-4VuPkiZ3uUrwJTvueRWwe-D9CK6v6YHvf97OthjINISSxLTo4PBAofJTR0z5u1NUvDevPRA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=AyUF1ckHv0UlbbHkt09AHQQqr4JpAsDcSUitTXV2A6xHOnleWMJsndVhsbzG7PCn3ZXz2kUGZPSj8uumxi2VYnCRyRYIdYNahZBcc3KV-Cp-In4PSLDK9vFkWCKkxevNEapv3Hxf5CfCSm~SiIVjBaJexW9xFEAYUWFJM-gU-tlBjC4X1VnrfRtPxy7oOiklLhvXAVYazEC79hIk57WMLyFs8WwPBqa-8ZnAW09GqzcnrmkNaTOh-0T-wnMgCq54y~J7rK1WEHV1MeFA7mx2x4HHYDLQgccPf97~2QUesQFUauoOEVmJGxsiusn32A-hnFR6LZyc4OfgnBHsxcekMw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=d9DAIKqNt055~D1qUVszbxFAxIiimXooaOF7IyKCT7wQVGZUkiSCHTB7LSzlkSAx1tuQJ2H0JCYOqhqwvitZCW3wsUo3sqdphEwNOFQdAkGu9EXnj~TOYOIH-3MLCt2F7B8ZDebEm9znL~yGPdJJRtrNtLB6~pGyoFTD~MqVrag5Y0XYSq-k6FRw150oammE6v4LZ4g~hZa2ff2pooEOtkag-Z0LjdTNGDkMD3QXanLpYXPBeLmvfVMxZba36QGGDTVrVLNgScJ6JuYCFrj3RhQUJnPFZDkZeDU7duVIIAO4xN1xHvN4ZiVBJD3B888GpbEe~4PRuyPTBOvGER4zsQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=YMK9vP53TVnmwk1Wym9FgdJWfCAIu4bIDw25IYbORs7kG-TKzbCnUCysZ8AoEWoABl62OpCdYduNd~-Xsufptqfms44hOavNod5~Bb426XCmLGoiwNCJqll9pVZfl2qX8QL0GaFuaCJBDAwKRQN1HOpM-epVrzmS~qIGCFiapo-LKiU8VM9NFA~WAugY9v61Pq5qy-vc8CTufG31F~qouVCdGuUR1nRhK2xVsv6AiFDOGEsa8EtH7Ten0LZxquYA4xaS~YLLq2GGYB1Vo8r~KavGXoyVqWtq8EJiasDyxjB2wVzY4QkFV6lluuYWqOTRgWePcnxA8nMoC35QyMTFQA__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=HIf955beOUYWhVeDdWBlJlIiPKoeeDS5xwYUfg-1brFN61XefP0SzEnn8cp4vydJNzuM6mAlzpt922iv4humqSXM40xs0~WkCOjfagJNYveQUzYE3cdPnupqFWXBnHU4SzmwgmobaBA1j3c2pNl0V6UUqt2DpWpetIxXm6gubrjs9f5xNg9xgTaAGi9cc2aE4V7Vc1Acrq5bknjMp5PPkpJIbRgVSRy0lh1qQCB9wcduCJ-KO7Oin2OY20Ky3Qf5TfnKxfZNmL-IYM~uCn8QBhTopQUGyftK2ZyjHYdwFLu5pye7iuAeWnO3W3FQyIZj3K2HPc~OT~ixRpRo9vDQXw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1760484495&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=bSJCGLp1OjJSqnybnn9hZGZ~fQfvmDWxVKkdTIszAecDb5xYtIPnIbeYiZ61zgkTcwb~m1AxAMp66CadY6kTa6u~0Wk85hk0ET3XO3FLj7c4rLyWfHtjb2WnuaYftAe510HfQVCh7n13DgTXmUe7uBEy0zCmaVRAnmpczCkILdUDnTwi0F2waSaYYuy6TV8Zq6B-ery~GDop0psA0kSZmhID8fmRLm6fLnU7KoSZplq-P0OV66bSuaueCQ6Jm77qAsnjHm5WA6xCbfC09hegmleuaJ9sxNiGMhly6bhHUgGTDlKjtfafJH7Kc00HTLUYjWW5Bvw4s4HM4pmn8PR5SA__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes