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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PgidGBYB2~LA6lJn90SAo4VDWQym7lnOOavALc6V2YD3nDn8QBfMMn3FJwAVrgujtNSX6z7S6F0qdXs90a13gXw07Aa5vu6v0-wPcYj4btKPQ1v8BNGTq-lZBzdc4MDuLpixuk4aENeYHvMxW0GfD7E9bbbOUHUBKavZhRu~QLg5VyIRCKWkpa0tQxRaYVeIaE9bYq59QNAkiWc~0Okgn5tVIYEqOmhubgBbeyYrEgJQCOX6L5d5qvTIMwxoJpJQnCHOtIpj6fiY7d5zfoSJTHydIgLjQ3sNkJSdjTp9snDqB7BHgfOhm3iUdtRWSpeFletLCjsr3FHekMg3z6JKtw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=EsARkib3TY5h3r7gICT7NaPq5k8oIdYRXdhJIBEeh~CGcqJZVxAB~ubuAE~T22KhRFpCYck605GWoEO4kSa~Y6pXUyLCILf~fIOM0gpB1rYYaXooMD3~iZX~afc9bWv9dQiIDHU-cN~MdE5y38gCcV82uXwXJIEblnx3R1RJY8YiFuiQvWl-HaK83khpC482XzMyzBeRQ0sturCM5zW8pxW3ecMu7Zpx7dlk1zv9eQnmUUhMFCKkk5S8y9kE2QmSBNvT0vNRqG97Kyrc~Ls2T4FpuUTaec-74BGe9cGjJJNElvPkeS6qQ9Mzra38Wi-7qQW55Q3bYED4YjNroceNvA__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=kheHJTfbjmboxs3lYiF7kNS7ORJ1hyouTJnxkA5SEX9oQCoq95a31VAKcDR5sam3VLpw5TF0nl9ueCL-ni1qMakh3IsZJP1cebmN5n9NJopKR4wO8mlRims8-cd6XxgbnMOMqNAnOwJUyui2pwJ5UsquFjHniDc6z6qgCPKbDRTJ4eWcWuCcBArDu7Uj8nkO9oHP1YTPbBIz3ZSjt2BSAnrpWjIwtizNcxns0H98UMbr1julP8LyOyUCaIg9TdrByADGbv3XUGiHOaXUJ22n4~dSMc7ocFF-Qxm9wVCUFDuUbsIyHDUp787fkDtCkPikgYuYYhYryjjriyqhwHKTig__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=n3G508x5hdMz2nAsAYpqBgTzDfskBcoX5ZtPmj60BGQw6aSRTRMbFoxT~UTqkF6w6qP3GVkF38u92OLGjsud6SzS0ealmx179I1XcyNd6upObiXx1sxHxQvRQv6qql2o-ix2Pclv4IEXvKOt-ivkQV1zU8WKUKDMGN2fRck0-kUiVxdsuXcfitdnvverGt1RP2I91Qtv7a16ZTX1~9QnMqs-BodSJWK7Vi~hbjrlDz517yJfKy5l5Z7VDT7wAobfS4Q-qW~xlsqCJqn~M8LnpyC5InLIY8pDcNvNuP2IJ6RWdQKFuJJMFA-fFSrtSy-yHjlpg93Blr3-4K3ooeQFEg__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SQXt87XStlh2C6e2~A8vvYUYf8nQFUbUpn43nUUmC0PFbGjSjxLIxoN8vHcs7Go2s6siZyE2lNwQn8AER689lwE3Z8rQ9qM600zwk3IL7njWqfJUp0KxDPW3K28Iqr8IYjnQkOpu6k3eziN~tokzwqc8mwIN20Vd6flFNnkdb6q1SipLuP0SbPykGyOfqZmg4oIedRqATl54NEMJLH~wNFvCpP9dULG4bhbGHkzhtazLkd6SVDx9IG5If6CTHlzqGl2JkG6WLnSnS-WKdFrS36MgJQr9ZqY04oQczaaLw8W3JXrvv0C~j8pfZnE~7S0poiRQwqJlbYE0U20Nwg~R-w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=gIbXGwhL8p7AQcxd~CgRnAWwjXk-qFREgmYrRyktG99Z-RXuHsqVPT-B3zzabJ-TSuhc4uJiqzkvsVfV-CaxXdEz8vAHw1a7Uv8MSrQLd7ygLa5WgCUzptZt2YW8LO8ChJKMmEHNCHBBQLtDClz7okUMYMXTOIQCn6g3kLucsivyVwnIPr7FT5iAHBQ0RayhhAhVsFP8-VZi4PduzTRmLPZdjFS4zpbdaZ1iNSkyxPh-rwx08DgJn~Rpm7sO~IvdjlSX-z4nmZku1qhokJPKyE4XILM2Cv0vEyuaYrtSIl~BGYxt~xhBcQGUCkaH4U~KDQlxSezqW~GZ~C3Sd-l~0w__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=K054YOMiYI3jqMANA5UUjfQThsEDO-lhb7upd0Hm~lcMTCbl~HSfSeJ37EH8C-BpdUMmv3n1j~vnHtbZd~Wozpj92-8lT5GvtT7E2BjKZ7I2Dt0XOiLZ2VH6DTACjMp13uXQ8jjYSNdEAWHdv17wwrcRYj6rrseJq69bJpJHDHLIIgbzPopxI~I7S0Uqu4l8f5jf7RuFZW99R4aAK2m542CMJY3gJZXVmVNK86SFxcbT9jmh3cCXvCSsxha3d5b7oPy8BHYJH7fN2QXz2dju6WXNryodebc64NEgfd5ahP2mIHh~j~yF0qcI-5Gn6DUptf-pY4ky5Lm21h6bCCeo4g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1751423616&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=OkMWcQFA9Ux0C-b0-PNUOvaKp9oOpS2cr6Xh5DwhxNbAHSG2eXWJ6sOPxafW8O2~p0nN1i4aE1ktz06wSjwBzv2A5synpGuWAlv1ffokexaotZ~r3C7vT05CY~eu2eEAB8PbniDIjmG64B8c4V5FBvGljpXCyJEuXRwltLxTUsYj1d~8f9ge3sdzFzaxR8VIWY031s5VFsWYS8HqtelE1YzX4~jkovmENsmLdaPw0IT7m8vIFMpZ8z34U3t6ShS9XnVeeBj0VCgFMmPKfTaaMf-l5abc7ueJ4CoW1q6s8YYw68M3RJax5-1dNGHeiu5KZlRRoJmI-6csVJy7Yk5eEg__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes