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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=WXfpLe3b2Z5O8Zlrf16GFE8oZC7H3GHFlFC~eFTKvyWPv14J9wEd9HKbGQuzjdZObSrquW8t0MvkPTjZcnN3l6aGwVEb34HXIJeXmPuVpu-pQQsVzce7Ve9kp-fE0IzkrOkRqlo7Vovnfp~lphVCiRYRn3BtdkvQ4LlE1R5AC98SMwXbwF33x1btXe8O9mEPybvIUTHGEo7VwNfyxS1UhOIDoyHJZP4IDIrJpaQ152NXjb6jt5VT26zZ8rYC2ar8GMLkXyznLdXmF0W9aljVJLPt-TwiMsypDTNDnMNiC95MP6RwIRXNEVkZ1zzAPhyW1PXij1UQsVeADmmrdyfU9w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=GR0ggfrFwd4fJD-6TziYmQk1hzctvjBKVTmZn33zptflWd9rDpavzStMdTNiMPWv3OZ7k3j9Yq~UWPFjtBwVBtJwCdnIQ3VtHYErb0a1qcoVqCZEweSMXKg6AU0sIiCijK7kT~symzn3xNBHeYnHFsFTsG5H6wd2-2y-BQC0fq2wKa5114Zjhqai9kc8QrUm8Tlosq3qXHHBCHmVzbbLsvkRuLaS-ZhiCpB5wVrKESYBN80USoeDxoeOm6hheoUd0MX3B9skNBCJlZbEzM-nMivWc9zUnpbDVA7u1~hu2~P3m3a4AtQyCRQSvIBUaEwlV2PGdPgmCcNikF6pmENvbQ__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Fn2cWC2VOaall6~1W80uRvt0vuybWSQFj~h9dJrIWyLkJBP95QXBI54lCr8iIJOm4jA8-A1o35VjQXTpTxmuC9kHdaMjdobqoXjOy2NfwSJ4AlR9Po~KJS4PjTb~qCT1IgvXlGl1ntwAgEd0glMPZq4hljQ7rSwXneAOrnNWEaXPO7PoDN-Z1bESXggRVbjWtg3Uc4Ic1D8Z25J6jUI1EonJ4IwPZZRrD0up7vbNe9pK48ViC9mEKyfWxmi6LvzkTa7B2PI6jxjyVtO5Ss8YEYkdZSh3qRUm5WuA40BlYm0i9Hj--mY~zlMvARDDVCcZ21Ya~qLBsWh4JWbW7jCpgw__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Nx9kIadEwZUCZIQh7yEzdhmttprswCFVbfgehE3f7CZZrBjKE0hEqqLs4D-BmgMl7~k1XIlKmy2Zyv1LdpF7i5uoPbcFahlDyfwcvIotp7MBooW9mTrcX6cZqjyRQkq6qntau5fWRu79VPf~YFPtuppaR0pQ8rr4JnVSnC51RcfvmFAkVSY2JyiL~V7YX2Ho-xmZ1s-LquzuUzvKZzW-QAbLO4JSEKSBQj7mDXv8VKzzEXvMwpMVkse7YlMkN2n4~l611J~MfJIk~D2bU4H08O09vnptzhbZ0J0Aqy7V2jeHpMWnXzWL6Mt6csrtJwCLDc7ii-TY4lfDs7dmQ1IEFw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=EoNybcS-lMhlKcTp32QrBwfKgEdMPH0KFq0LUsNRfvFzP0utc98V1ZxG7Hueiae0-5KvdcqeqcM8n8amOn5hqZmVUNHYVYePP2VCG0sQsiD7b-9D~r~~fRzeU53TS4IRW0m-tgi2b1E46EYXl9VjMA7HqZB1xFtO9aqne7XN~AXRg~FQuBJubc3cqFCL1FJP58iMJZUjoLkHl5lvHEzqr22NMaeYMq0HPVyV44-9CoM8O7WQa1BW3QceA9p6UOrvBbNiC5WM20AYl7~7558-qYBRIJpfHD1Wc~CjHO2wA8YSbcvel95cMkpwVIJ8Jjjx5MyCHKg-BrdUplqQKEVM~w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=n0jTAj2p2t2vsBkhS5mT36XyY9AkcRKMlKteHHz4FaA70jWmzx7llPOoyKnag1Pjh4exAn4CK9Ki1jdSI8wIx9WsO0uL1f2IUpvrAgDSGi~DE-ZuqV5ppt5Wu5RZyOItoOTtKewfhaU7Qcmdza5RjdjyYtLkruFgEqi7ylfc9NuIhv7sYy2i0nSUPIvMuxRWIDsZaB27uHjQXxXMveZ7XXF5LpzlCJfgvTe8MS-xtJ5RKKCuuRrZEOnU57SJc7bHCvBN9sI~7tRTugW4I2lgXiix413q2obhRyRwDjb2AWI07cM9JxaMZd6iiBYVU9rJBY6Lo3XHqohF~D-W9uRPfw__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=nq2vFuvy527Pt2Er0P1JvnDDUIpmgNo1z5auDGttgdjW3Wpu6br9~JtLug8V7Aq~qQtq2aX1ZeAGS89IOia5yDvZgFaspjKMIQk8Se2F4EEfBaUjKvOlvbBxaT3OQLiyWbzG5or6JPVSJ29Es71hDn0he4VyDL32fAerCL-xT8ixZuEpIL2G5-02zUYACekkXXhb6DKzgJeMHZ0xill3hHUeEkYAI6DAJxMmMtKqtPjjT4f-ayp6RRYESjlwhyF1xvFYP-hv4BVYBY7x89y8DFJPCS5P0bZnFHvsMesx3rJO4mQH6d9vxdfnxuXBZJKthlEektqvGnBJXLgCNbukag__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1762345789&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TjAXIkhGesUQRftmvoHhMQlC5w-oNV8d-Pt~blYBoa32o4XtuXiSXHmOeUvdfSrADF68NjYlVO3vkNUQdiAmmLnfNlyuxRUjxUqzMVKKeXcXHLwZzEKZ4CYllXOfaDgTBcktFJThsjUI73owHoQ5AvEUlb~9vUHni4hZ3FAVDxzXRWUtiFyiBmWcRRF-9XE34gXtcswl1E9f7aZwRF6N6---s~WB~UFtFpqCl6vmWRnG-cfBhhlm~JNe30~ZeZZyepc-P7ytVy7AynmnoKj8DQBqacd8xDa-UWbGFRmESqf4~13Nh~oShxfjOiJvTzfRUoIQEVMQvJh60DowAKBEhA__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes