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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=eJ5qIkULXAhYEJC6nxxmPVXCf-7ySkA9pH-KmQ0nKKwulPg9CmsPPeHqz~3apU~BfbjBEh5ZtqitzuM~8caUi1OdBv90UGljGlIEhIPHfsjwIzz~D-1rylt-fofSMUZofIKyKJ0q98wWGcSlrEz9Ftn36ps7Im-oQNId0fUk9r5HZbFwy3~3wToAF2yCytWdSs0qo7fqIKR7tb9nZLAPIqbGLJohLJC1wqCo5McvIbEqgCU~yB~bn4j1FZCpNF-haHguOyxPlMIaGHkBivLXtgtDDzWzZCNmBiAu3LpHH9hBqAdrDvmr9XpJSiFlqCYUXa3fsDXtrC2XgPQP0N39lA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=BUuR0XVkytBA4OE8-xu8XZWOWDtSqSrnth8dYYDBuYx7Ter7L1N1B7KPdjD0cMsAN0vboI-uEJGD9ofhqcz2CCYa8icyLJjeevtn9dl9Skoh3glwnewXJtw6A9UJ5qIcM4T62u5s3DeM1uk4Gz7SIZJo3N76rC-wmIkWqof5sCMmjRMgyn~U8JZ9pa7jm5-ooYHFLifjI-0vwy5zMCtufezrzJM3~XLnMs~G9JdDIF7hF12koS6VXcWofNd46dmGCW5B1y2bJtOwU9k1N5wodI9kxcQyg2UNYdl6T7cylJqPIXUZT-3r4XDysONS1YhTa-gp6ub2AobCS18YMs7oVg__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=e7zJzpVU4f5PJkDmOIHAKvhQaPfBbKMYjTkborF0jtTql-h5Z1Ea2WCtqUQOW9qLFPMMsTa~h8OloSjn51puOBb9jIJ2j3bDqMpy-KtEEXoOdua-QacoN1egrZPWCpvVFU5LDuvh6oRvLssbU6aIANwy-iKBzQXfn3~jfM4MU27TEpY6Gi1beoOdum8Z315sa3gDm~yYWlWdWCEvl48ZH7KLh8sG~0vCY4KoOjc6JVCHiJHH7amma-r7c5zdovN0FFAcoUK1FpPhiy2t~-G0Iyn9nT1vPwOHMTPHjfPt0q-b0wpkM3NsovAN1mvd1Fmzv02B29KMqXL~NGkNsKsI1g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=f55N9heu6FfwLlKSkM2ARNtjmQQNacjRjKIYVPCrnpKLHjqvD0YXVqAGxq5oUziH~kulNWq2HkPQAWjw9TBKKOYRn2~hxwgzVbas9ckQ-t2yzcNDJUoQiKHEkAVDtwvnOlJcBtCmoDFusFT23RY7wdL6i3LaIiRL4l2-Q-gg9lUIe3lWp8ENx62Pj--8v6BV9iWfvMJLewrFghjZtkDUVzHrB3PQI2ZuncbrmDec7HPCY8bB0aQ1SAwOj6p9NHO8MUsAYWnxYIih5ucgwVtaooLZffB-I-Ql9iGSrBMb76iW3xy1NKsfJGIrh5JkqYMzycHwc7Hjkm5kD2tvZz0stw__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TopSOndOH4-9OnPkR~5zpBPbpECY4eKjKrtM8cUNVK7OdIAw51oy53UGXNe2i9h7a4ZdC2iBGpAmUVNT-Yoj4RVm72PlECO70F1h7V~JXSP5k---4uSvHQpJlzblhiv3grQ7MGRAKy-TkRVzCaiasiRGfUtvjthVTjJ5zt8Bkfd6wCKPTPUcHZ51q6ZF0AKxKQwdTii6dnH2cNlqiECR8~3WQAq3hrVBDw~oI37lCp3VprVO2qRWVOMn0jfemIThLnKisUTNtUmB5WlUySr2tYvR9LbcXz3D3A9TSNtSg18LkTmB4wslngNlO236IFqa2Uo73gOsHZnjzkIoXmsNtg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=MHyv2bgxbIwXcmxz6ZbzLKML2xuCxpTzC14kfTqbt2Wb9CoZ4zlceuhS~Rw4wnVWFYj4PMdcrkQTm1K6e5GQ6WKzRvI9rXqSVz-7F975fjaRf~8dExO3TCuGjLucRzeOUtOS9QXcevgLKt3eg8HuWDZsvHwlz~ZdJvDe9N~spLyWNryOhbWgdUu4MMcvTXKo-mKEri8dgBn0JgJDYOqPjnWpJan-1E-tRwldgvGuHpv6BhQVhklyLeMFkMNReoP4BP9mWEdR2iglrS9dQPdmkE6BnNG3bGTTZb-M5F-TXGyOHaZQI3o0VaXIUilqjxylY-q41vNJvkoYMlfsJOBTqw__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ieXfBPi81w9j7OzRsvW5QVnnyuFfk~eW6j~nGqKbJPL5w~vE8-a7z11CjJxkWOC446Ru19OopI4UbKPwupxnVFZzcTogGizXyRE3nyhTKlyNHCMLwNkX6V8rGDtmKA9tMKklfA~SxufonlUxoNqOe~vzzFwIVBks5DeU5AwflkfGxLSFplZdBIvC84FTjkXZfrcgP8FYo~TDG6G5EFQgnfdj8F7qyBsOht1E5g4e6sQCRNxl0AEH8oygr2m~XzFiuoMyiNliDTi5MYc47oxYAASWovrqgJ9tkPrxSxMTlVoWwX5qLcgYMdpCp2HXfa34Zdu-wsdk8VsY8DtKze3LTQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1732539416&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=U27CaLakyuJ34h6wlmu-AH1fp7lXFvzvfskwVMF5mBwc7RXvFZaW5X7dn3nccWeR8nEK159DGpkGMtP2Sr7OcAPW3TWikdCC0UXVu8nK1adYrczg5JLLNFFeCh5fEC-LnVt823w4bu~qEn8KvwZu~u1Kp2~rPHPor3uK56vcFfwmR5Yqe8QkQOE8dRYc3hw94nNB1qrOVXuHeWpOtw6smadZMvbGuv102Wxi2FRQTYCjpMmvEhtIJuWaAj-eYmvac4wIpxKo6~eAd9syr9RX8AJXk1sVL9DgSs-CyHVGgJsclHPDC8uQrzY2YbgEWE1yaOzhb5QfoprhozPtkSoVsg__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes