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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1737229257&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KzorwpHjHpj0955V9ZvP8OcVRYoFHCzau37jO0cfigCHkcpN7YcSWsb3YSXx7Lqyjd~ImiqsAEDr0vfOKgawTzMMSIt5qCrVtqgvzK4mLNDopyUg3vYq1MlgQpMAn5sqOeFSP1GcNsXAE7BK2lHflEVti5Ds5lciKCOxJG-TsosUrq5mejTe2DM89QZxZ43b0yVQk8r82N~mQzDOszMQTi7uXoH-InasbQFNHjx~LtEfiZhDePrR-eXka9~0eWuhCMpm6qcsNxCo0fNE0vWcwa2reWAPFMVo79bN0c7ECAMEWFVKmYurFR9giLe3RHNBDkY9b8QtcJAycFE-vQ7-TQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1737229257&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=I0WF2FxdTSuvuZfCZJO6UnwCddBLsbGS0X9NTCZmBTsqFeJb2qViaWwtYsAY32AHOjdAnUryo8tHy~jzXdFgTqwetrxJ8-uimy4mFJJSR-XzmUJuMMsY6S0qlCusGx6yfYqH29JYcACJluBd6IZXco94bKTZWaMmkXHIP1zwj6h8WjWw~dOgsb~-hzdfVTG0LEkJj3z~RZGb7~ubgIEj2Rx~HvFL2kjtm3BJBROrx8YAWLfCZs9kLAiwpDCH6DWe08u8pKwJ1jVQHGjNsth2noajv8zhlY~doHCuLFC2TSwqcpKzajg-WLRkTpcfS5res1P5Ba3h-KcwrwOZ8ZiZvw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger