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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1746342266&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=CFHeQbaNSlmMO4OFqSuTEJUNSX6zK2DFgbNVoWfKQtRpvZVFp5mrnsqF8~dQmEiMPuOknWr6StCaHmiN12Bz1YxZet16pS3EaCg88YaALJJsMnttG-N3AcOlZnRAHM-JmLRbqcFlU0UJYQvbZZbV2E2TekiDUXyOENQ6xE-WM1NzXMMiJ2VZaACgtT~jV9j1dvE5T~bIQq3SGE68pUKOJWH3ST6mB0yY7JPomx-ymF2B8FlG6jry~NG4qoXD62z5P4mh4NvwPB-fYjdJ~NcfX3RsDSZjIAGN8JrdICaXl-I7z3hqOIs8vN8CAZLC0NOoIH2uDYmkGbLUZPXoTZlXoQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1746342266&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=nS6iD5d9Za3rGks1tuZb-xQ~bqSp-YCWSQni6fsCqkYE6PjX8Tzi92rL8k7nsidNRysvpu~TB2E0nX387gATMXtFGCKFmdnftnfy8A1O3k9fRMOW~7CKIzRXcW5p8ZBgj2LgL3RmNb8eMAJ3knh3fm2732WoRVnRP7b3NF7dRuAc5z90m7x6r7glBVq313t3KZbcagzjs9HiK-rjRwrAHTD4C1qZhQSGUJN06k58rmgXERLOQtocSr5fPJswvplsNSB8G1GYkDH7mx9ItXVIS5OL0hxqDkFrMXuPch0fzCAhXuyzt23o43I0TYJ2E-UvarUY4kpHNWK-EFO09FoNxg__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger