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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1758238196&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=OY9twoiJhedAMCepu7JaODqkt4A7AbGuqjkd9lGwsOEgcZ6y4ARBZENaMR6zvN4iACoiqk3LpgWvednB7P7pvDZIoj95HbCpzTvb-8T5eFv5K6grj8rMEJqBBL4CnK3JyLtEZndvwYDMye8BlHbSSlYovgJlokVYzY1fFQLZpgXralRiyZuwYn6e~J9g1fhI~UxwFuFHci1n3HqD6ePZMwJRR7TV5LQMRrEZCSYaIIFsALb0bPRdIaXwJSgKVfwZvqpoBzecFVR3RlLiZmMIeJaXyKC6-gU7r7Yznza6juaZY7JJoRtwMVJtFkDPFuP8k0fRVBan0lAGL60Yb0sOGA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1758238196&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=bH9n~3RfXHArYW0~~-u-h09tNyUS4O016y2LaP1kPkMyJbMOTw00IrBYaBjvZRN08ty-AW-j~JqrjM5~~I0CoCXPlc7ToQjAmEIE0-7KjFp0EHLjybkOkVSiYNYnniluvQ9fCVw4cV12a09eYvyfb9KyNX-3fow709bf3h5ZvCrMiOSHWTBBgdK6zMEV8ttQxvqrhLLd6pLnobShSPbjwp7T5JR9QuQwfGCywR19jITdPtP46IbByQUQipeVbbvLUoWfMdpz7Lx6SIoTz~u-9DkB0wy7iK9tKi415qry-jJ111X1mP3sPi9De1s-haTL3MQLSz0m-Z7Y~htsfmKwSA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger