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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1732250318&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=SSIWy6tyX1vMieOlJuufUY731vXRml4qxLUsn-iSasKdwR3HVfMFgLHb7fvKwFsQ0T3p-ed8NqyVgW-EEIOy7JSfHdxHDV9D3Dx0WBXaJmyhD2Nhy-nopZpZq1~P7-i8JfJ5RcQtJRXKEnQP9KgqP80LdhpFXFLbHopTCvhorEhbWI-SWh79GDdD~HQAncNlaLxEzy83Qer2tTaMIGrVOUEAS0KgEkJ4oISMAN41U4uGoqMjOnVDpJGEtejYsat6K21xOiJWv6QLrv6O25EtYOrLKtFpmsjcCtBb~sHMq3oj6E6fipRWCncq7yk7woVYSUv8L7ttwGCv3KGGimlWmw__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1732250318&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DcdLZPC4wGALPrX-1NKXyx992YJsGdf3ZZK2k6fv0dFtQ9zzjiReSZAjg1cIrKrqoFznohvqS1AQOQK0TF0QfLkPtp-FA8zXeOi-0T52tmGvQk03wvCbC5a7wrKX2pYYsxTtGScbyH2LOR46~~8xE88-ma9c6PaIT6vkROgfvOnFrEqY4BzP6r8imyIKsRN0ZdEzpirafsk7tzG55QyXmfNd8AN52RJ3P3~lAulo1DS9F1CZaF0Zhnmg9-S01DIOz6-QXFZ5ofKF-GiNyBjF4JVeKyYdawkCw7y7r~XyHWB8iIZs1L2tiqCoCZz0jqwoneTZ2JssgosbX671T23hJw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger