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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1760465269&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=VUE0~qHdUkIt9Ku6zZ1eUQJahGz37~uDreiNZjTAAb6oPa7Tb28JqFuD3qTdReNr123pwEI7hSlwDdd3xuOh6Q1oOUUN9rwtTTMcfR6v5HiU3-0zcRICsGRhXJLsORSHksZG~XiNJMKEjBwD8wiusYWYxP6VdT~14C4KKUlyAAFencgSGDHFtupALG8k6cMwmHK62e~EUeNJo~hyq28osPVdialu9GtvPsf1Tpl-HCni1YdKzl7210qIlzeDpgFKsZ4ypEWSjoICO~0cLNJYfKmgg-amN9QZQ5naw~rD4qNiUVlxYASZH9ciUQTx3LHhDX~0E5N~2WLhDrH7IjEZgg__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1760465269&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=VgC5qg6n9ziCBu225pZCHPKXdWDXyk16Z8w1hundHMtub9lndCym24SRdNC~h0dJ82T~bVb7VQli~cVKcU3zFIEcKw2c7sh0xWFf2SrEZRdbQ38G~2SF4stn8uFRfsBAq9CEONXzZfFtNg15ZUpP8gomw-k1XVOxPyj~tuIpBnvXvK-hnvMcetRsPX2jdT~~AVgiN0qLXBXQ2gxH6ys8PJWJIIZywcsMFxWhrfd5PobGTyNn5ajxDSCPfO7tpe9daq8ep8ObXT1odXljkIzNR1-CGa~xnjs3AqsB4JgXUscP9PQrM~ylB0~dXdZedKleXZYThO-NKporVqmpzjBLXA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger