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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1749345960&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=h-~lxHHlxXBSCsgSfa8LwIOY9MCT4KlpHD4cWT85p5oMTkZtWRORvWrf4mho92La09sflQeHAO2HglJ7Tbo40xEPfKy1tIAZoythiKL3rSQPgXm1mkl4Sc8Q9FuvbX8DV5fJB4blR-fQe2oAtpedQW7SwVLLnEe0tk9m~d4aqk~XsrGJplUeRKzoqALN4lY2-jZAnoFS7CC8764y4IXvJUQoXimW-9ZU-mM3DfWEzpo8xd0GLnt63cU95ZkVwc2vo2CWWuVUekBXFBaQ-9HngsUNb~sl-sBRFzKkCAo2o7GrWkkmX3jyyCHMWOx0VY8d0XuVxvDr3zcWLoaKcfk~Cw__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1749345960&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=CvO2ORijvg2cBXyoCNs66ilpROs19uDPjbh86pz6iAb9X4iIVE06n~1MqUfk3Y1FuQ~1K7eKVH~XWwJ3LQT-rtWWVbFchdfJZwwgJHD89w28JiVdZGNsH~Av08u0Dl7yMMYsomxShrgyE9YFPXh6tT8q7RRgPR1wu24ne7CCQaC1HAAhM6dkK5UEg24pJkCYwrTRbfLwreHP1tv4yzbd7FRSplvb1cSMR3-GcjdG60ILffOGh3HgLNPoXWvSXHtC3UXEJ4~GpQlWS3MZ3g~BGkVUrmhG6IZXtZGyZ-RUvyb68IUf3mXMS3gWH6XsoOl21rao9VeM8dONFCs07BosPw__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger