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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RxU9WJ-a6BbmvWLl85NFpjOkhofA2MF51AHUa6P-FvjIJkcVPfQpsuGtVP0Rq9sB9oEROMvhBBVtcLJIQbu2ZYZ~nJf23JX76xQOQouyAMr8JjAxkp~Se5IXdh~3xseLFf-v2CMyT-Xsyf87~qMKCF6WsEC9enTei9akQiWam0MisgMNqKvlrX-eNcfZtS~hCU6uZFDXhyppBKbkGhjFtn98Hdkj0ZelIEr3gi4RgiQlVK07Kpd4omjaWD7QpDuB59bjHNpqxH~pK8FH~ueNTl-1HLAbzlcRiFvmUnOe4GBi1FpJ~ycdzm~74MNC7XxBxpR2QM0XeoyH2nqQw5Be1g__"

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    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=DDYi0gg5XtmsC2ZpsT1H4F-t8bmlZA~7bJ5gTdYg~PSVMYQVU9YCFqOyM9kGhW8iwC-EFjSdrjHiEw08RN8M~IEK94mj3ivAJMKgoGTP7t7mX0T8yMBVgI3yu68sWt6BAB6LQYsvnBWhofaNPvVPofGQBSczxvb6u-A8kmdMWXUUngDWxTXWHSJQuwKDbDJsh8TKsNmLooaFUhFRCv58~WO0bUk6DQ380AzUPNvUBfA3BCpGyU9HIvj7ZWrYnGXHysLqFmS1wGPxOxaB83dcqUuDHi6~LwMGOqj7~tMwsZMDuPW587Mfv6eVat9WLoE3eNwjiFMKyYESOzq9XJr0rA__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=A-9HAiFvmhJZjOa0-mUxz3zK-~Xt8kIuBtCA3MKgl-5LV3Qt17f4aDnTukoW34xXhQGkkmnbEZjQ~zd-2y0CWWh42qHNcbhlndQfeNVbYrjJ7ychOyRdEgHviiI-HXTpSZWoFB~DUdN6ODjMu4sZev62DdQ3qhSYLpSW-zcpDAAXdXPN2ZtFaJgEy2p4YE18u43A9oTOEFrU4ES0ViKN4cAgEBYP7hTikyooWqJIhXccSf7zrgqCCuNecV-WDhLSH9650cjN7IfcJ-Smno9W~CwPJ30hFBtWDXJ0gyTNN6njoJBYGDa1pM6H6Mjsq7SEEaV1WpGBcxAMU~RzSZd5BA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=C-D3KkWkdv03tSpswAkvTiEL-w1-1suKybojpYj~vp9Yh9cZSdpOkNUXVn0QMAdmhJumFM2~U7z6W9564tM2WzoqdBJxSiu4~UHfy4y0-R49nyYJhF49xM0KzYVrGx~KIbh5EiobM1Qvr1xiNWSut0DmcxS1ZSkYr-XTBgI4ZBzA~4cyKDyHKOtA2LqXUB6YBVwS7ETVnlEInkNlBvbJxw8UgF4KcWDUIfGhE2nZdroWoVJgouiijyHbSq77j0jGEa3QQbyyjFmCENfcYYh0Na8V79CpBaljuF0N7t9qZ9z9Ln5hv3kH0ey50x~4bIeNcAsm-7OpLkAPcmRlslMTqg__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=oeRbf~w~IXRSK0DjsF2q4IwdUHA9RNPZKPEfHhQPd6vTOedTxt8gSxBT95UEsCCZSKtCVAmRpYZj2LYCgI2VNbplndbmkVmjA0wt6ren0ly5UxgFax~g2j9fkSIcIucrYrP8nL0lPGWy86SirJDhg-i2SJrXrXB9iMO0aRvxf3q~VfuHT4dOI0AqpodN~cwgQsKEQR2OKhHxCBd-KwRWLdRyzK4dCLbvagxx313Uh~fFuR3L-A91Owo4h9shWODROyXGJUjt-xSFCFNEO6ALXNtQWc2~nkHEVQsA-7~3JCIQdYqQfHinc~6iWVgEvGZSRQtJavetUB1g1tr-AiL86g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=gcrmHIQn7UOvnjnh90pczZOkPzFW1FOmkXiyBNPSDR-CkNb8c0j4NTbu46vZeACsHw0DzDDmUi-YuY5ZJ8YXz0NPMhjVcOeRPbnlcaOW~nsf2X7ph7zbPnvuSWOw1ppDTHmgLhk9R-ZGIpR9wFu0cA~ebncF0CogmVK4xqnGKSHL1Bs-Km1gxbDDhEtKkMlFyJVyMW6k-bn826pIEMXStTBYc-V75vu7xoGFM-PYXRi8HvcHCvWsZdxs4c9TEmVWESmlFIXurBAHJBtN0vj-t8h2WoUcpU3LLwmkpGjwSRRvL~UOIB-Af7ASHV5T2rXGyWme02Z1Jm1szmO4anskgQ__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=H9NZzH6WQ-5R3Lp6d7r~jShq2hUPjWjrbufgES8XvHGXoQDqMIt4IyBxwRGibRNr7tIG7~3bvVfv2wftDkWK0O5IpBnqW2Cxu4~lickgLgo9Gnsn4EsoVCqFKKZMXSk8oBN1RBSD5zs0Gk04qoCxZr04qhB6tTZ7Go3HlBcItB08zse1VglGkgos67D9BdwS6ERrdkt0mMNxDUeW5BHPTta37jXYoq1hHbnZ4Rou6UZdZjGk~tbCQQySZ-awZ9er4QM939t99oxbq0uvWzwskmha-A4TOCGEju2xwQnIrt9tR83c08H551-owYwZneS4CXI2I9ABlBJ40heZLObn3g__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1743819718&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=I~69T1vWdQrMZyKGrU7FB7JqmjzJ0aMeXjJHcsJti3b3ZDSyFnBd6LEsxI3ZA9q~aUxiAq243OVrYtN3JLBL9KM~Mu7JUnYW~rbNG8BOwnrlGrLPLuQBexOfx46UBkUK1xN7UJghj~QW8SdTZabviRvKyWMnCQb1izNpQJvY2j7YDTFcp14ImCJ9oj57Ohu6IHBEzg3p9BavvbgXPJRzDcLlmBsK0XaabHuhpzuHZtBf0LpKRdzNz-BhC-igqhS-12coez5Mv7Fn8MtTVTvtcuZ2g4Ghz8oz~A0gkO6U1vKsi3zpjGw2wPrDWzKrE1tPCY5lVRDhLmFWC1cTHVnpaw__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes