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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=UfTT01ZYr9h-6m6bLoCO5G14sEqrWLzIcBED6Xhdy2rm1M7IoNCLFecbGa9XrliA2xwK9W-5ynjyiIkctjdx17p9fxJX7Edc7iwSbCfEhZpguuqX2E-TtJiIA5jujj53S8GsMB0jwuI3Rd5yZooPl2EIC6h7vo1lmR6CHnm3PdkqyPnqKoMgX-E0fpkLuEI7r7ATciVcks1fZ7~D5EFr2iU1MR6gqjj0wVsTjSZKbRTq0ZEGMa6Lfu42JXS5CSfiJLr0b44RPYsY-Pf5i-TyUMNulrpoT54h58PzcLNqgwoyIdsdIyK~QqZLif9zWE96lIk3-2WR9pA3e8-2zZuc2A__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Kz5lJqAIixpmZk~hpGwBEAyKGhSI68R~BVOXINFw5~NPX93MB2siwwq5f350UMvv~MEks1olw3gyOi~leUQmvTEZEzx9jK8Y1CmWuQZP7mtY1zFzuVeQ-cJH0SGPbhkPZDmwpI7f2kpMiVlMSpuQkfMbxkpe~9RKP4ERqQpbk9d8LBhgBbf6pDxVMZCOHog3OIKWHyNGNGNyChTvZcwFh2A1LpVnURTkctfrekvHtW~0VkZ3vfnBI0Vu3kFvP-vXxweeAPVh4N0GbMqi2k~f~yHzcR3ETyCRXG1aZ3WPep-Y2xiEidfxwfFlOs20qu-1ckWva~xCmoOrou4ViMEkFg__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=FCU5dAILPuuhQomivfHpBaYSMnyfARfKp92m70DPrFQeT7KDoocxoeymivG5V9lknRApE-7RUstkxigJpDU7Kw~43XnBHcXG4nT1YoH67ZlZXTIDD1GrkAi5uQeHKCGzO3Ya8fENNo9-qKWzv6B1cpRTOIwe7JdfD7rtx9SjLj2RG7V1yCN5Rkrb-nDS-8TUsjuta2REWy8g~TPf-rjI98Xvmpts5aFaEa~N954g3Fb8OYAxSMxDCkv8A6kM~F1EUXdGtvg2~v0lleyz4Jdt-i2iRwcQ3M~RyGQI1ihIiZcVcSrjxEyG3nKittw9pAVjyuY~aNvh88RYhAuc9aSvig__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=TIks7AQFsI7dTWqnieaqrGBVuQnTUoBFOM-z7VvgYrCkBYbWNaUPl~A3DPulJx0I~I1UknW17NIbISZ5FReGskYDazlnfHCbonOY1TzW7usQmkQFBF5TW~AaY3u1mNDdoHgRTl0v~zal7~S15WP17PxYebOH-MoYUNpnvhYpYbqZsMg34e-ABRNVLVJgpPFglDrnbRixI~V~EW-GwjgvxV7Fm59Kd4OTNGvBF3Em-rJt2xJc0OFJAfWNAwezMYqYmPxSKwqwIEpdUvWDQL10hjojyx5~zt8eqKWqzMt8IuVuZncly58q7uKi9yB3RZbtu24292w~rc5h2bPUTphdcQ__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=W2vocsw~XSqaV1yYkLkMQ08DEIKdLnBrDT5A7BxqHDoSz~uiBtC6QcFCxwTnEiHcCsXAhWhBoxnvBoa5enmzihHPebg3bwATYkWkKur5R7gXbG9PV1TZ2BCQO2vR0gc8QTIEE0S2QupwrxVBfR~5kg~7bsw9U~tuCFh24Q7xm~at-JW5q~ax-U94cX4C3If3EnJzZgY23RZoLU8NQKBrNcdIaaDKEEvo183QaZ0NH6ItA66-m1LkFF2Pu7YTX~~mRlTwM~3bPQVmABWETkbaPZZSdaD8a4TEOxOUXWXmReuzLeBlTpCPKA3Lm12Y8dNXe8kPSIdKOeSFH-JFGk20oQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KJ~xvKQp5HfbxMkvcx9Iz1fx8i3TSRsUY5DZwuqZ8SdbrXdHJ4BwTarPf7N4AIZC-ySw6xGmuCohaqvNRg1UwpxfGlEfacnQnDyTnZb82x4mGTFRSv5MmroMHDfP6HIva1f2gUn79vJf9pdt9ghnMw1VTpBaYsi5LOUrXTubhADQbO0-J9La9cXnb0YpEnkZINRDDIRoX61GSzik1htP8BmmU-Y-4yI0dBv~axCynPiYeWkSsZFXWr3Fe0BaAT3YnaWQUSsR4ikH1aDyb3I3yQ7aEYtcrauMRJmrmUt8S~UlsJGfHvWNdKYdbpXVGqDt5jxRi0XHCLWAewmSpMpc9A__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=cIBa4ITPhW92pvdVWm~KZfauSokq3Z2Sj9Bb1ISiFcv7ZDWg0InB6fEZPCkApumSDEbi7BRlyyHshEpeKAIZbphFTXiq28mVrULPMmH-XuzqUMzW3AtLvJfSv6xbifsNV0NpIn1AbCpxYLks6LoZNaJ8FvUARRaUIEE86z-Os~jUnQ9zp04yzuBHQ~vQwNsVDc4zDXJWgBDWxzOAVygp9EMAtKdnhq7E2rdecN9xtrHGnn~5fLpaL4Jxo2pYcvXKhtFfmYvu5Ae41EEc2k604-OekcynE7QdveANHdXBczgmVSezYU8Mu-12m2J4iihgNqDZCOqjFYRKMACvyvmb5w__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1765391959&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ixy43jfev7O5tlfZCbg9UpFMkyzTrLi9DY6VymAE9-KLfEHH0kQEAQCeYuxhe9FNAAd4z2f09iIheBVsZZqQ0bMUZMuaM0HbYqMEuveG-w55TmMVsFmIPjHBJDwdmj~mhKSDKA6TvDlMiOcWylid1UJaNuc-6UYnAQOQyGZE2~bAhjP7ZJlURvKAiGnvOSZPhas-t6p~vOq8y2yPFoByA6Z3O8FImxIzH9ijbIRWGiY-K8WU58jUkmbGTKKqqYTLFkeFmxdwU89dER362iETEz0njIvAN0mcVmI~HPagMjo49IfqRzgd8~JUfERdDIafl0xsOtjWElKLOB2O9G~YKQ__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes