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Previous Versions

Xenium Ranger 3.0.0 (Sep 4, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.9 GB
    md5sum: 10e28b33f0236a5e62d615dcd921a9b1
    curl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=cABxmlWCG6cfZFcZUl2O-dVNpvfXatwOYDn8-8LoWhh8T0UnpD1usZdwslYxYCnQgtks~JDfA6vvEsN8MdNynVDdL4LODV1oepaTAJq8L7xpxFvlV2NpIo0J6FeExvjYXFCRAnPFN2LWWIXjoS5U~3RXgdhhRk8DAergwK8uds6HXcbbW8ii4~jI4lsQFwc1xNNhC5-AOVnk1CHWCxTVH3ghpAh3lJqSLrjxYWNAJwE2OZIjGcA4z06F4~cvdfzogq7L0pkhx7UHc9Eh8EgVhhdII7p~rOHKDOaix8IygGo1EgaUxEdOCkbnC7bm5IGH-eoXniPrA5vq6dFuc3wQXQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.7 GB
    md5sum: c31be85a7e19edb8da484c295f3586cf
    curl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=NUsa8-fjTTthgPoZZ1IuOe2RTZezUuxJohJ4fOHUr071ta3YhqXboEam-lv2KoWlLiSOa9FOvKGVkBiUF33Z70X4y8imxx37eww5Yp3xLSXgM6i-q8bturs9RQnigsxrKfxXyDACw01mPGD4jdtYVustWIezEv3r1t00iZk1~4UowDB6j-QKmgpce12AaTPy~Z86RQc-O-W3lP8vlkDtGREvunJJ0kmD03DBDOms7jbJi7uA0uN-LKhSBDN9b~OcHwRaLTAe1CXT4CoZdAtz3TAP5K9D5TIXf9vS-jjUjLcW26PzYHMFV~~Aed5y6dUXVZQ5vDqiyx-sl4XJFv~EPA__"

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Xenium Ranger 3.0.0 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
  • New rename subcommand for editing the region and cassette names.
  • Robust to corner cases of importing transcript-assignment data with empty cells.
  • And more - see full release notes.
Release Notes

Xenium Ranger 2.0.1 (Jun 10, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.7 GB
    md5sum: 45d207dc432226dc003a31a287f5ec08
    curl -o xeniumranger-2.0.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.gz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=V3YzHXNxBPCqQK09juept3UmWyncVesDqrGF5Ul8Qq3sJ-uwD2OZ3ok8YeKLBSosr2GA4y39PHxeh8ZdWp6JzRH8gv6yuHBW4koSYQQ3ghWJ~h-Zg5brrxBVB6BFbypv16Hca5wa4xf4TcR7Ap5LeasPPm7unkTk~~Ytm37Hfxp7aZmzCmp75hrqPRN-Y7ZjF7Bdeyn86B~W0vihFrF5VC9PTn8QkZaqqU7ei4BCle5tXOtdKU3mmUhkGG1prePxCPoHLvOwGpr8ZHUXyiAkG4hQR4TBeK2oWUsDbgcLHp1F9ItH-jLmTFG~91odbTNGIIcu2WxAgJVvVvqI9y8MLg__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.6 GB
    md5sum: 244bdbb3d159ff557a7747c03ec487a7
    curl -o xeniumranger-2.0.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-2.0.1.tar.xz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=EAoS80e5vJHfKghGLM89FN9mu~8qfvfRizMnLyZwHP7mHUXM9wuaepAr1qw1l1mOSuqSmOl4OJXfqMN4IBnhkZyPQl1CEmpo2Rl8fGTzYIsm~ypZZ5-Uz0Fp4O6lpI~t6UJ3OKNh3NKHYW-X5KoLQpujALGF~injQ89GppUJUz62hWRM457ngLcXKXB0ShypygrnwfxYcpnx7IzZW3wRA5D7qbEpvmw31r~Dow-WJlEfJkokT9HGJ5MQGoweQGNnLx5LzCcK87yP7ZjA6KQpnokfPzzV9FCSmTw4KUv3YdkralLsEX2QYhbLFOJWcij77mCxd8n778bXwzGqtkz45w__"

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Xenium Ranger 2.0.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
  • Default nuclear expansion distance is 5 µm.
  • Enables reanalysis with multimodal cell segmentation algorithm.
  • Interrupted runs can be resumed.
Release Notes

Xenium Ranger 1.7.1 (Jan 23, 2024)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: 51c373964e46c041e08ba73888657edd
    curl -o xeniumranger-1.7.1.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.gz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=bmXeuMOtRX3lP8nTa3lg6aJYu7WAnGACSnBRvZNiuAJWVg-6ZZyNlCHGHTUAW1Zgg09555eav5IstTOra2vkXFQcWC4IkVNwF2rdBuVV2iR79c7RD7QpayCSYV~AhCD-sjCb9Ol9wtViVS0bfUrLEMQY009dBUNFgfJCpyiSkT5Tcj9EG5gUHBIfz6eh1K5h1g04JA233RZIqsYi7F4xu8BwZdarCiWhTTMsb17R4cg5ghCjnfyvOGvu3BGoqELyYhfLiMZ6qtVTgzuJoly08Ua4Vkk0WyHoHQU4bgbftRopWYSdMztw8djWF47lB1ZhZt50IWPXluiQGPqmApDljA__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 43e6e4433303aae30973682dc5219f20
    curl -o xeniumranger-1.7.1.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.7.1.tar.xz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=ixaP8lJG8-2So1lD7KzY4TxhINcK7-HSULutIKPUmZ08uKyGV6ZeVnx0bgbi70ggCXQ3glXtphLDtqcv6-CCvY0VFvPiBdiU-9VGBfHSd00Pm77e2wQhhSmiW7U~6Am-OJAmTeZxJsdHQ2dD5gFZSijnh1fv6J8Rt3XNDaIZqjBO5r8VHynEYKlah4HzwfG7JLpez8G9D0ge8ZcyX-NRkPE1JgIcmYtkVsjnBCl5NXlMdvef0xm7spcMSNK3Hmdb6LOWfIYD0etpcLY6WfaJtRfXojnMbvm5gw6JCR-VcH6EASlhc4H6UqWr6kCpI~A4KE-U7eIkl7U2d87RGPJ7SA__"

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Xenium Ranger 1.7.1 highlights

  • Supports reanalysis of Xenium Onboard Analysis data up to latest version.
  • Image-based import-segmentation now compatible with segmentation masks.
  • Improved memory usage in the import-segmentation pipeline.
Release Notes

Xenium Ranger 1.6.0 (Aug 17, 2023)

  • tar.gz compression

    Download for Linux 64-bit (tar.gz)
    File size: 2.58 GB
    md5sum: ebd970ceafc057668b9e664df310a5fb
    curl -o xeniumranger-1.6.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.gz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Y6L3Gf34uaQntdR8knEKX~-ix-dqDbK1bw41pkxWnWbp747XKx4yqvuOBzrPa9JxvKZxMj1Nw0hejmWD5phw25MRH~ckBagGzensD~s2itQO-7Cw1o8kAALwm4Y0~DXepC1sCl3FBYxA77IL~aDOWJ4YDB7p8eC6ywIw2c3XQOoPWVHtaV2pjwU5P~6~bnWcwqX5bUVqd0Z1tjaC0fMD6KcJ904ufE9XMNycmxurOtrYkQoNGfJY30i5FR2IMbKek5VdZi64c5LvccfNlX2yfgTT6MpE92VKoeutMuZ-xfLyK4xv859EgSgiVCA1elQgPqPRLeyxUFlvqJcVQX~LQQ__"

  • tar.xz compression

    Download for Linux 64-bit (tar.xz)
    File size: 1.56 GB
    md5sum: 6fa799cfeef91264fdc174ad43b6da3f
    curl -o xeniumranger-1.6.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-1.6.0.tar.xz?Expires=1757887331&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=a8wKqfwkavESXgNYEmVjmbVyykYlgurOygid1XZTYs6-JWg~NJg5V0Pmb1KTaZlRgjC5ipiGl3mK5yQbcBLqeAgW6fzWZuL7238fxjFPMNKGbfkLr~hizWdLIf7MKL1N8S1RprfuAqffHO3ywnWfqNj0mdnNH8tA60DGh3AE1iWKgLqxwTkxB8-Rds9Pm7C5MFj8XFjvVBaVIu6app7kSIeMfopELLcIUG2VNAhTwezxymtc8YE-TpriGxfTfIKrilzewzgZ0aRxHT7UzJNMy-ljju~SsP9IbzpmWUJ6m1m5qhhodK27dmY6BM4x1uyIHuQf1LaDd0-WOu2NUptckw__"

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Xenium Ranger 1.6.0 highlights

  • Initial release of Xenium Ranger!
  • Resegment Xenium data with customizable nucleus expansion distance and the latest 10x cell segmentation algorithm.
  • Import community-developed nucleus and cell segmentations in multiple popular formats (i.e., Baysor).
  • Selected the wrong gene panel when you started the Xenium Analyzer run? Simply fix the mistake by using relabel.
  • All pipelines produce the same output bundle as Xenium Onboard Analysis v1.6, so they are compatible with the same downstream visualization and analysis softwares (e.g., Xenium Explorer).
  • Backwards compatible with all previous Xenium Onboard Analysis versions.
Release Notes