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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1757861491&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=c13LOlKWWRoWD6Ln3mO8OoINEiqGRrbA68yrNteaW4Uel2n0UwhqRNY-kqtNyCRB7xq20Rrt5xtmXNrsXj2ypROXsNOZzQRWhhsmCz2Mei1R8Pw0rPlxJ0ZhHAMy1K2Qkd0-K5zhlmCy9wXTgJXQfA8WtmhcHd3kWOXhskGJ~NYQQlWeZ4EcNEyU4OdYXBDWL6shbtiJJGTIov3fRM56t-gdU6wDAADvucOolEAQRl~BxkldGdhUzsW1lGXkR4xL8g0DmxF7SoZFr7LIM8et5Dbah12FjV8Ib~U71am4Vf51cosF3abpDXYkjL5wrH0X4Kq37f8U-QQ~gfmq6CotvA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1757861491&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PiYhazPzp~jYwOs9xrpCqxlT3TIcwvseFp-K3e3ufEvLL8D8UpzzLQGYMM0o~963qscp0~VqR1kvoT7DPIOcwGiCaSlTNv9RRXFKztE2B-sEwChtrYXHVfEBnN1ozz9uWCgI0mzK8Ee8zciylfQVi1whRtMWFUblBaFuK3MIVRgnxPNmKKloCrqArPAHzdiOutSwBNYE5q5S~zCkRASQJ1TYWC0yj~qHTe6HJeiloRlc4snwQ~siUan8Xr7nCsE8HT24WG1s5VYWwJmt5~WMRkWlOPiJlp3fxvwX6XpzgN5PiLi2Qmx~p~1tVduk0YEkrW4o74QQQ2o7w21MqQzcXA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger