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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1743819984&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=D698VmrAeQZ-qRqTZVKUXEo9-eFMwyWt2YvbotZYKJjPpdSEuxxGvk684LZ~pAzVembvUI-eBj-XVx3vY5ZM~f-F0KlIIoIzkNsEoVwEotdtqQH5GBxaxYFHYbUSaw1LZvKaQSKS7JjxbdBVIX-uhRVJ6DwAqe6VFHeNw85teQEINd68l7K00VYnXiR0z259dXgUgzhbdsqKKzlm-Da6-Ok3F-QiNBPH2~XjM8f7tCq5J3KZSZw7qVZPTVZvLmJEKZ5RXBZvjPIyG2UidEkgB6Fu0Ynf09xPgagkUJZ7vTc5E5Ga2sp-S04d-bYhvrd5g~HwgA1OmKDWGceLyr3XPA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1743819984&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=Vy1j6CZXT6fl7uP25xlVsXeXcQrPLlPW35yIidn~vaZcswDs5zZCXdXMJUWDT5O04cCtaa18arnhKVk0rkDUjANgsKTNnpNFEbSXzHbWhDczXDFb1phc5Ls1K4LCKBTJG35N5dfJY6~noSdSj4aE4avQewbrKolfXwBT5uoYUet1BZHptsNxY-m0hJ6K9zVWnM37q6ZGgoqYEF9myBNsHLwKFVU3OWpTOCc2mn-wrWHQUtmj9Vq7q9mPRCCDxO92fpgBR~8W9zwCYbSiA~e6JBWWT~Kzc3FbBpYpQvLJkcL~wKwJGaZHTDIHLgEDbIBZTJ3neeq~1-~lAebZO1OPZQ__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger