1k PBMCs from a Healthy Donor (v3 chemistry)

Single Cell Gene Expression dataset analyzed using Cell Ranger 3.0.0

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Dataset overview

Output and supplemental files

Input files

Learn about Chromium analysis

Peripheral blood mononuclear cells (PBMCs) from a healthy donor (the same cells were used to generate pbmc_1k_v2, pbmc_10k_v3). PBMCs are primary cells with relatively small amounts of RNA (~1pg RNA/cell).

1,222 cells detected
Sequenced on Illumina NovaSeq with approximately 54,000 reads per cell
28bp read1 (16bp Chromium barcode and 12bp UMI), 91bp read2 (transcript), and 8bp I7 sample barcode
run with --expect-cells=1000

This dataset is licensed under the Creative Commons Attribution license.