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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1749346313&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=PWN5xGRu6jMo5i1MDDuVN13idO1bXbfNeka6o5zaf9nhCKfpN2p1ewAr~OG5DPF0~kge51eaBD6B0RLWRzbRx5~h~EXJ6I3OkmXEcSpDDvOPGD-XDkyCncZ9rDhHqTPuujWS~FcQ9XqvA2mNg7MzKQVpVgGh9d4g0hyJFtBDV0wefsb9Jmt0gYe3PpIJdSwTzSlKOBm92jTwqwfQan9SwHeb2NKNKFxdQZEJHKQi~CoipNThr~LEUN6vpM8MdQRGp89ma09taM7rOvuug4HyqUKOcnveN~-7k9ibkzL6Z1dxbWn8Q9KccbmpfI-ICo6CV0fXzMVdBuEQqKlsKJOfsg__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1749346313&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=R7QDQquDcLdOhE8FQxkJ-W-4vng8P9vBBpwc7VmwdVnw2BTZ0PdAt65sLtSajg-JoqxriiPchEMoKmxKa3T6x3R2XH8AWBuQzfDdNR5B0qR-r1cSW2xtZFYiVxRgSaSd-nJvno4WJ2rSDh9-hVAwxucWS0L83lpfT1yHmpLnme4y~E3fnjCKRPYNLPpctZBihUQnq3hp0T0pc66tuq1pitPOb~lVpA31oTBHeRZvrvdE~IXVjjTmY6iG0l47sbofPhE4nfVjOuGC8UNjK0xVHWmEqik75nliUc5gpqH2tt01biNDd6c11R-ZQV8E~CdFNwzxXIarkQd3lc9zBETQuA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger