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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1765822441&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=KrQp3l4d01B~bYkvfyFZD6-l9pIKLUUJ94Yn9NbPtZjHeNjesBEtWhe3hP7Z-bJRAQMzqppqUmN87FNJKnLY8NRGuv2vmmw5iPn5shIQ4ec6JZzzioMv68o9NVKmaXmjf7KeSYaRe6lKfAcW6FREatlBWPnPvBnnEf48ii0x2erMV0BH-Kl-JwHayO-eZxDAe741uHsXQLCWS5LkMKW64Q~Nsl3BPJ7XR7OpLUniOPLco6tg7zp5HQs4FUzi6~e6qwtAIgT2RaKO0CdtTNwJ~OLkBEOzJuRlVUteItBJ3-hqw5Yuey1Wk5hhi~UK4-B8eSGC9v58sgbtxWZ3VwquBA__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1765822441&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=UpEB86qHge~VQTY~EiVwnGlNelzMYJljTyzm8lGIGvMZCihbw0QWr81xbrlX7tQLkcBgrnAVo5cf8U7PsA8JpuHFhZ7Y9f1cvSZG-v0Hi9kIaHcf9n7WkNqbjaSGRvHA9N1oCrq3aND2Yfq2DBJzOz8YjkRI~2YOCL17k6OgYEQ18erVMTwe-iemI48XZWXyg2D6af~Fo~82tck5csKgRKG8lFOxe5igXrVWIGTto0dOUKalaxdsPrrmBSU7y1zkJv2M0kP37B0M99~j42a479HjJe5CjmWFRkWZeFlNkMcF1c-3NxVgUsn8~G7g4B~u3xKWVLZF00bGDRjSzKxzpA__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger