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To set up and run Xenium Ranger, please follow the following steps:
Xenium Ranger 3.0.0 (Sep 4, 2024)
- Self-contained, relocatable tar file. Does not require centralized installation.
- Contains binaries pre-compiled for CentOS 7 and later/RedHat 7.4 or Ubuntu 16.04 and later.
- Runs on Linux systems that meets the minimum compute requirements.
tar.gz compression
Download for Linux 64-bit (tar.gz)File size: 2.9 GBmd5sum: 10e28b33f0236a5e62d615dcd921a9b1curlwgetcurl -o xeniumranger-3.0.0.tar.gz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.gz?Expires=1753578985&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=RqLeC81kk7TBbZKRjPPszJxiEDLCEE1qNOulQMJLmla5mwb-gfOo6qE-JICCdmmjvx7Ui0ncpPihZBSjjrlD1m5fKF~he8bGg6RaYMmNEgnLYAjjJ-CYz-rjr6ZD8paNBis4mYWiMocGpKlgUmXy9Af5H8ojimFo~rczpDg1C3gblTSBpM2rzo4tyH6IoAumSEbXVKPA9ioOqpRY1acLnOKk3ouPk3~eh9zC6MOJUc3HautDt2f3xbaGGOSDK97~pjKu9Rmaz~dFKwyIDe9Cdgfxc3iyMTSGRXtXL8gr2bZCHD9YZtFSHnL3ZRBxHTrTZz4lhB4g4kgAY9MpiKFqOQ__"tar.xz compression
Download for Linux 64-bit (tar.xz)File size: 1.7 GBmd5sum: c31be85a7e19edb8da484c295f3586cfcurlwgetcurl -o xeniumranger-3.0.0.tar.xz "https://cf.10xgenomics.com/releases/xeniumranger/xeniumranger-3.0.0.tar.xz?Expires=1753578985&Key-Pair-Id=APKAI7S6A5RYOXBWRPDA&Signature=iQNtaoZF1us4kXjF~SujYOMKhTZ-gozHwa5bulLBJL4qmbg5m1dLsuwqUua729zbwrlLQhnKjJ3GWonuvCEEUX0A7BIqH3BIjzyJ5tkly1AqD~d3AM7bFuWqdl4e-nDRuu2enSvvzjFNtXQvrveWRJ-3Sc~5lrxE2BnCMapiTJT8sKtL3Z0WZpE-qYkwruDz3WP9QWbIHqgrDy9owIiMhxuWLu9MV1HoMRRnxHEHlPzp2yZAjMmoXmX~527jUQ2fclZdc5FlOx05Z7QMQwH6dvuQKOa1wv2PmLfOXzgoGiIPecZ1MQL4LlaT6Tn~QCSpWofehCha4msdUsdip1-1ew__"
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Xenium Ranger 3.0.0 highlights
- Supports reanalysis of Xenium Onboard Analysis data up to the latest version.
- Reanalyzed data gets updated scaled transcript view in Xenium Explorer and analysis summary features introduced in XOA v3.0.
- New rename subcommand for editing the region and cassette names.
- Robust to corner cases of importing transcript-assignment data with empty cells.
- And more - see full release notes.
System requirements
System requirements
View the minimum requirements to run Xenium Ranger pipelines
Installation
Xenium Ranger Installation
View instructions on how to install Xenium Ranger